Transcript Information: S_Transcript_280370.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeHomolog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.61475786945335
Condition 2: 8 Hour
Replicate 10.47389756260296
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.97088371069307
Replicate 20
Replicate 30.28024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280370.p1 GENE.S_Transcript_280370~~S_Transcript_280370.p1 ORF type:5prime_partial len:90 (+),score=13.73 S_Transcript_280370:1-270(+)
TTTACATTGAAAAGAGTTGAAGAAGATCCTTCAATGCCGACAACCTCAAATGAGTTAGAAGGAACTTCAGCTATCGAGAAAAGTTTGAAGCACGAACGTAAACCTTGGATTCTTCACGACGATCAGTTTCAAAATGAAGTGATTTCGGAATCGAATCACCGTGATATGAACTTTTCAACAAAAGCTTCCCTTCCAAAGGGCGTCATTCGGGGATGTCCAGAATGCAGTGATTGTCAAAAGGTTTTCTCCCTTGGTAGGCTATGGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280370.p1 GENE.S_Transcript_280370~~S_Transcript_280370.p1 ORF type:5prime_partial len:90 (+),score=13.73 S_Transcript_280370:1-270(+)
FTLKRVEEDPSMPTTSNELEGTSAIEKSLKHERKPWILHDDQFQNEVISESNHRDMNFSTKASLPKGVIRGCPECSDCQKVFSLGRLWD*

Click here to download the sequence:
Link to NCBI Protein BLAST