Transcript Information: S_Transcript_280535.p1


Annotated TAIR IDAT3G53720.1
Annotated Gene Namecation/H+ exchanger 20
Annotated Gene Symbol(s)ATCHX20, CHX20
Annotation TypeHomolog
Chromosome Positionchr3:19905826-19910027 | Reverse length=842
E-Value9E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4293151229544
Replicate 212.548532988423
Replicate 312.982998361882
Condition 2: 8 Hour
Replicate 13.1814102104814
Replicate 22.7117392290578
Replicate 32.3849899418161
Condition 3: 24 Hour
Replicate 131.519773614634
Replicate 222.769470371575
Replicate 319.048816753514


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280535.p1 GENE.S_Transcript_280535~~S_Transcript_280535.p1 ORF type:5prime_partial len:429 (-),score=65.23,Na_H_Exchanger|PF00999.17|7.7e-22 S_Transcript_280535:791-2077(-)
GCCTTTGTGTTTGGGTTATGCATCCCTAAGGAAGGAGATTTTGCATCTAGGTTGATCAAGAGAATTGAGGATTTTGTGTCTAGTTTGTTGTTACCTTTGTATTTTGCTTCTAGTGGGATGAAGACCAATGTGTCCAAAATCCAAGGTCTCCAAGCGTGGGGCCTACTTGTCTTGGTCACATCAACTGCCTGTGTTGGGAAAATATTAGGGACATTTGTAGTGGCAATGATGTGTATGATCCCCGCTAGAGAGTCCTTGACTTTGGGCTTGTTGATGAATACCAAAGGCTTGGTGGAGCTCATTGTTCTCAACATTGGCAGGGATAAGAAGGTCCTTGACGATGAACTGTTCACCATACTAGTAATAATGGCACTCTTCACCACCTTCATGACCACTCCAATGGTGTTGGGGATCTACAAACCATTGTTCGGAAAAGCCGCTCGAATCCACAACCGCCATCTTAAGCAAGAATCGTCGACGAAATCCGACGTCGAAAAGGTTCAAGGCTTGAGGGTGCTTTGTTGTGTACATGGTGCAGGAAATGTGCCCTCCATGGTTAATCTCATTGAGCTAATTAGAGGTTCCAAGACATCTCCTCTTAAACTTTATGCCATGCATTTGGTGGAGTTTACTGACCGTCCCTCGTCCATTATCATGGTCCAACGTGTTCGTAAGAATGGTTTGCCCTTTGTCAATCGCCTCACCCGAGGAAAGTCACACAACAAGATAGCAATTGCATTTGAGGCATATGCAGAAGCAAGTCATGTAACAGTGCGCCCAACCACAGCAATTTCAGGCCTACAAACCATGCACGAAGATATTTGCCATGTGGCAGAATATAAAAGGACGACGATAATTATATTGCCCTTCCACAAACAATGGATCAGAGGATCAGATGATAATGGTGATCAGCAGGTCATTGAAAATAATGCAGGAAATGGTTGGAGGCATGTAAATGAGAGGGTGCTGCAAAATGCTCCTTGTTCTGTTGCAATTTTTGTGGACCGTGGATTTGGCGGTGGTACCAAATTTCACCAACATTATAATAGTAATGATGATAATATCCCAAAAAGAATTTGTGTCCTGTTTTTTGGAGGACCTGATGATCATGAAGCACTAGAGCTTGGAGGAAGGATGTCTGAAAGTGTTCTATCTGAGGTTACTGTACTTCGATTTCTTCATCACAACTTTGCTTCCACAATTGATCAAACTACAGGACAGCTGGTATGCCATTCTTTCTTTGGCCTAAATGTGAAAACGTACCTCAAAATAGACGCTACAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280535.p1 GENE.S_Transcript_280535~~S_Transcript_280535.p1 ORF type:5prime_partial len:429 (-),score=65.23,Na_H_Exchanger|PF00999.17|7.7e-22 S_Transcript_280535:791-2077(-)
AFVFGLCIPKEGDFASRLIKRIEDFVSSLLLPLYFASSGMKTNVSKIQGLQAWGLLVLVTSTACVGKILGTFVVAMMCMIPARESLTLGLLMNTKGLVELIVLNIGRDKKVLDDELFTILVIMALFTTFMTTPMVLGIYKPLFGKAARIHNRHLKQESSTKSDVEKVQGLRVLCCVHGAGNVPSMVNLIELIRGSKTSPLKLYAMHLVEFTDRPSSIIMVQRVRKNGLPFVNRLTRGKSHNKIAIAFEAYAEASHVTVRPTTAISGLQTMHEDICHVAEYKRTTIIILPFHKQWIRGSDDNGDQQVIENNAGNGWRHVNERVLQNAPCSVAIFVDRGFGGGTKFHQHYNSNDDNIPKRICVLFFGGPDDHEALELGGRMSESVLSEVTVLRFLHHNFASTIDQTTGQLVCHSFFGLNVKTYLKIDATV*

Click here to download the sequence:
Link to NCBI Protein BLAST