Transcript Information: S_Transcript_280555.p1


Annotated TAIR IDAT5G54150.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54148.1); Has 103 Blast hits to 99 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21977461-21978237 | Reverse length=160
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49743927542393
Replicate 20.61858288479014
Replicate 30.34472403894581
Condition 2: 8 Hour
Replicate 10.99651356622117
Replicate 22.0908269756754
Replicate 32.3905623482222
Condition 3: 24 Hour
Replicate 10.81663115852688
Replicate 20.21181132314343
Replicate 30.70716012350793


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280555.p1 GENE.S_Transcript_280555~~S_Transcript_280555.p1 ORF type:5prime_partial len:107 (-),score=22.82 S_Transcript_280555:23-343(-)
GACAGGATTAATGATGGCATTGCTTCAACTGCTCTTTTTAAAGAGAAGGGATCAATTTCGAAGGTGAAGGATAAGAAACGTGCGAGAGAGACGGAAGAGGATGAAGATTGCTTTATTTTGGACTTTAATCCTTTTAAATCTGTTGATTTCTCTACTCTTTCTAAGTCCCTTGTCCAAGATGATGATGGTGAGGCTTCTGATATCTCCATTCTAGGTCAAGAGGGTCAGGGACTATCCACATCAAAGACACCTGTGGGGAATACCCCTTTAAGAAGACTGCTCATGAGACTTATGCAAAATGTGCTATTGCTACATTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280555.p1 GENE.S_Transcript_280555~~S_Transcript_280555.p1 ORF type:5prime_partial len:107 (-),score=22.82 S_Transcript_280555:23-343(-)
DRINDGIASTALFKEKGSISKVKDKKRARETEEDEDCFILDFNPFKSVDFSTLSKSLVQDDDGEASDISILGQEGQGLSTSKTPVGNTPLRRLLMRLMQNVLLLHL*

Click here to download the sequence:
Link to NCBI Protein BLAST