Transcript Information: S_Transcript_280556.p1


Annotated TAIR IDAT5G54150.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54148.1); Has 103 Blast hits to 99 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21977461-21978237 | Reverse length=160
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30589656592162
Replicate 20
Replicate 30.63595641667588
Condition 2: 8 Hour
Replicate 10
Replicate 20.2571476855141
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.78151074401198
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280556.p1 GENE.S_Transcript_280556~~S_Transcript_280556.p1 ORF type:5prime_partial len:87 (-),score=22.02 S_Transcript_280556:162-422(-)
GACAGGATTAATGATGGCATTGCTTCAACTGCTCTTTTTAAAGAGAAGGGATCAATTTCGAAGGTGAAGGATAAGAAACGTGCGAGAGAGACGGAAGAGGATGAAGATTGCTTTATTTTGGACTTTAATCCTTTTAAATCTGTTGATTTCTCTACTCTTTCTAAGTCCCTTGTCCAAGATGATGATGGTGAGGCTTCTGATATCTCCATTCTAGGTCAAGAGGGTCAGGTAATAACCTTGAAACCTTTTGTTGGGGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280556.p1 GENE.S_Transcript_280556~~S_Transcript_280556.p1 ORF type:5prime_partial len:87 (-),score=22.02 S_Transcript_280556:162-422(-)
DRINDGIASTALFKEKGSISKVKDKKRARETEEDEDCFILDFNPFKSVDFSTLSKSLVQDDDGEASDISILGQEGQVITLKPFVGV*

Click here to download the sequence:
Link to NCBI Protein BLAST