Transcript Information: S_Transcript_2806.p1


Annotated TAIR IDAT4G38350.2
Annotated Gene NamePatched family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17958324-17966846 | Reverse length=1297
E-Value5.6E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.690046668982
Replicate 220.715443630338
Replicate 314.219208736211
Condition 2: 8 Hour
Replicate 158.441336823288
Replicate 249.354688983824
Replicate 352.557395239763
Condition 3: 24 Hour
Replicate 122.84541250543
Replicate 225.950929285894
Replicate 318.868399631308


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2806.p1 GENE.S_Transcript_2806~~S_Transcript_2806.p1 ORF type:5prime_partial len:131 (+),score=14.36,Patched|PF02460.14|2.7e-23 S_Transcript_2806:2-394(+)
GTCATGGCAGTCTTGGATATTCAACTCAATGCGGTTTCTGTTGTCAACCTTATCATGTCAATAGGAATTGCTGTGGAGTTTTGTGTGCATATAACGCACGCGTTTTCGGTCAGCCATGGGGATAGGAACCAGCGAACAAAGGAGGCTCTTGGTACCATGGGGGCTTCGGTTTTCAGCGGAATCACACTAACGAAGTTGGTTGGAGTTATTGTCCTTGCATTTGCTAAATCAGAGATCTTTGTGGTGTATTACTTTCAAATGTACCTTGCATTAGTTTTCATTGGCTTCCTCCATGGGCTTATCTTTCTCCCAGTGTTGCTGAGTTTGATCGGCCCACCATCAAGGATTGTGGCTATTGGCAACGAGTCTTCGGGTACATTACAATTGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2806.p1 GENE.S_Transcript_2806~~S_Transcript_2806.p1 ORF type:5prime_partial len:131 (+),score=14.36,Patched|PF02460.14|2.7e-23 S_Transcript_2806:2-394(+)
VMAVLDIQLNAVSVVNLIMSIGIAVEFCVHITHAFSVSHGDRNQRTKEALGTMGASVFSGITLTKLVGVIVLAFAKSEIFVVYYFQMYLALVFIGFLHGLIFLPVLLSLIGPPSRIVAIGNESSGTLQLS*

Click here to download the sequence:
Link to NCBI Protein BLAST