Transcript Information: S_Transcript_28069.p1


Annotated TAIR IDAT5G09450.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2941864-2943324 | Forward length=409
E-Value3.6E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.68113498939
Replicate 231.596093687305
Replicate 332.878161610765
Condition 2: 8 Hour
Replicate 151.812800177923
Replicate 253.581958470456
Replicate 345.631703391404
Condition 3: 24 Hour
Replicate 137.972340684885
Replicate 230.554175606631
Replicate 335.497692125719


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28069.p1 GENE.S_Transcript_28069~~S_Transcript_28069.p1 ORF type:complete len:405 (+),score=65.55,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.022,PPR|PF01535.16|0.37,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|4.7,PPR|PF01535.16|1.7e+02,PPR_2|PF13041.2|2.9e+02,PPR_2|PF13041.2|3.2e-08,PPR_2|PF13041.2|5e-08,PPR_2|PF13041.2|3.9e+02,PPR_3|PF13812.2|9.7e+03,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|6.3e+03,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|1.5e+02,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|4.5,PPR_1|PF12854.3|1.2e+03 S_Transcript_28069:59-1273(+)
ATGGCTGCTCGTTCTCTTCTCCTTTCTCTCAGAAGGAGATTCATCACAATCCCTACTACCACCACCAACAACAAAATCGGGGTGAAACATCTATCTTCAGACGCCTTGCAAAATGAAACCCTAGATGACGATTTACCCCCGAATTCACCACCAGACGATTTGAAAAGCCGGATCTTCCGCCTTAGGCTTCCCAAACGGAGCGCTACCAATATCATCCAGAAATGGGTCAACGAAGGCAACTCTGTTTCTCTCTCCGAGCTTCGTCATATTTGTAGAGAGCTTCGTAAATCCCATCGTTACAAGCACGCTCTCGAGATAACAGAATGGATGGTTTCTCATGATGAACTCGAGGTGTCCGATTCAGACTATGCTGCCCGCATTGATCTGATGACAAAAGTTTTTGGAATAGATGCTGCTGAACGGTACTTCGAAGGTCTTCCTGATGTTGCTAAAACGAACGAAACATACACAGCTCTTCTCCATTCTTATGCAGGCGCTAGATTGATTGAGAAAGCTGAGGATCTCTTTCAACGAATGCAGGATTCAGGTTTATCTTTCAGTGCGATTACATACAACGAGATGATGACTTTATACATGTCTGTCGGCCAAGTGGAAAAAGTTTCTTCAGTTATTGAAGAACTGAAACGTCAAAAGGTTGCACCAGATCTCTTTACTTATAATCTGTGGGTAAGTTGTTGTGGTGCGACTCTAGACATTGACAGGGTACGGAACATTCTTGACGAAATGAGCAACTATTCTAGTTCTGATGAAGGATGGGCAAGGTACCAGGTCCTTGCTGACATTTATATTACGACTGGCCAACTCTCTCCATCTGGGGCAAGCTCCCTTGTAGAAGCTGAAAAGGGCATTACTCAGAGAGAGTGGATTACTTACGATTTCCTTATCATATTGCATGCTGGCTTGGGAAACAAGGATATGGTTGACCAAATATGGAAATCCTTGAGGATGACCAAGCACAAGATGATCAGTCGCAATTATGTACCGATCATTTCTTCATATTTGATGCTAGGGCATATGAGAGAGGTGGAAGAAGTTATTGATCAGTGGAAGAACTCCACAACCTCAGTTTTTGATAGCTCCGTCTGTGATAGATTGGTGGATGCATTTGCAGAAGCTGGTTTCACAGAAAGAGCTGAAGATTTCTGTTTGCTTTTAAGCCATAAAGCCACTACTTCCAGTGATGAACTGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28069.p1 GENE.S_Transcript_28069~~S_Transcript_28069.p1 ORF type:complete len:405 (+),score=65.55,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.022,PPR|PF01535.16|0.37,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|4.7,PPR|PF01535.16|1.7e+02,PPR_2|PF13041.2|2.9e+02,PPR_2|PF13041.2|3.2e-08,PPR_2|PF13041.2|5e-08,PPR_2|PF13041.2|3.9e+02,PPR_3|PF13812.2|9.7e+03,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|6.3e+03,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|1.5e+02,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|4.5,PPR_1|PF12854.3|1.2e+03 S_Transcript_28069:59-1273(+)
MAARSLLLSLRRRFITIPTTTTNNKIGVKHLSSDALQNETLDDDLPPNSPPDDLKSRIFRLRLPKRSATNIIQKWVNEGNSVSLSELRHICRELRKSHRYKHALEITEWMVSHDELEVSDSDYAARIDLMTKVFGIDAAERYFEGLPDVAKTNETYTALLHSYAGARLIEKAEDLFQRMQDSGLSFSAITYNEMMTLYMSVGQVEKVSSVIEELKRQKVAPDLFTYNLWVSCCGATLDIDRVRNILDEMSNYSSSDEGWARYQVLADIYITTGQLSPSGASSLVEAEKGITQREWITYDFLIILHAGLGNKDMVDQIWKSLRMTKHKMISRNYVPIISSYLMLGHMREVEEVIDQWKNSTTSVFDSSVCDRLVDAFAEAGFTERAEDFCLLLSHKATTSSDELK*

Click here to download the sequence:
Link to NCBI Protein BLAST