Transcript Information: S_Transcript_2807.p1


Annotated TAIR IDAT4G38350.2
Annotated Gene NamePatched family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17958324-17966846 | Reverse length=1297
E-Value1.3E-245
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7661502676224
Replicate 27.3542631858383
Replicate 36.1475786945335
Condition 2: 8 Hour
Replicate 121.426939794834
Replicate 221.25325620774
Replicate 323.701192456015
Condition 3: 24 Hour
Replicate 18.6859417688791
Replicate 28.3100642446607
Replicate 310.088817762046


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2807.p1 GENE.S_Transcript_2807~~S_Transcript_2807.p1 ORF type:3prime_partial len:420 (+),score=72.40,Patched|PF02460.14|0.012,Patched|PF02460.14|9e-22 S_Transcript_2807:61-1317(+)
ATGAAGGAAGTTCATGCACCCATACTTGTAATTCGGGGAGTTAAAGTTGCTGTCCTTGCTCTATTTGCTGGATTTACTTTAGCAAGCATTGCATTATGCCCAAGGATCGAGCCAGGCTTAGAGCAGCAGATTGCTCTTCCACGTGATTCTTATCTTCAGGGTTATTTTAAAAATATTGCAGAGTATCTACGAGTTGGACCTCCTTTATATTTTGTAGTAAAGGATTATAACTACAGCTCCAACTCAAGGCATACAAATCAACTGTGTTCTATCAGCAAGTGTCATTCAAATTCCCTTTTAAATGAGATTTCAAGAGCATCATTGACTCCTGAATCTACCTACATTGCCAAACCAGCTGCTTCATGGCTTGATGATTTTCTTGTGTGGTTATCACCTGAAGCTTTTGGTTGTTGTCGGAAGTTTGTGAATGGTAGTTATTGCCCCCCTGATGATCAGCCTCCATGTTGCTCACCTGATGAAGGTCCATGTGGTTTGGGAGGAGTTTGCAAAGATTGTACTACGTGCTTTCGCCATTCAGACCTGCAGAATGATCGTCCTTCAACAGCTCAATTCAGGGAGAAGCTCCCATGGTTTCTTGATGCATTGCCTTCTGCTGACTGTGCTAAGGGGGGTCATGGAGCCTACACTAATAGTTTAGACTTGAATGGTTATGAGAGTGGGATTATACGAGCATCTGAGTTTCGCACATATCATACTCCCGTAAATAAGCAGAGTGACTATGTCAATTCACTGCGTGCTGCACGTGAGTTTAGTTCAAAAATGTCTGATTCCCTGAAGATGGATATCTTCCCATATTCTGTCTTCTATATTTTCTTCGAGCAATATTTGGACATATGGACTACTGCTCTGGTCAACATTGCCATCGCACTTGGTGCTGTTTTTATTGTCTGCCTAATTATAACATCAAGTTTCTGGAGTTCAGCTATCATTCTGCTTGTTCTAGCAATGATTGTGGTGGATCTAATGTTGGGACAATGGTACCAAGTACCAACCCTTGATGGTGTCATGGCAATCTTGGATATTCAACTCAATGCGGTTTCTGTTGTCAACCTTATCATGTCAATAGGAATTGCTGTGGAGTTTTGTGTGCATATAACGCACGCGTTTTCGGTCAGCCATGGGGATAGGAACCAGCGAACAAAGGAGGCTCTTGGTACCATGGGGGCTTCGGTTTTCAGCGGAATCACACTAACGAAGTTGGTTGGAGTTATTGTCCTTGCATTTGCTAAATCAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2807.p1 GENE.S_Transcript_2807~~S_Transcript_2807.p1 ORF type:3prime_partial len:420 (+),score=72.40,Patched|PF02460.14|0.012,Patched|PF02460.14|9e-22 S_Transcript_2807:61-1317(+)
MKEVHAPILVIRGVKVAVLALFAGFTLASIALCPRIEPGLEQQIALPRDSYLQGYFKNIAEYLRVGPPLYFVVKDYNYSSNSRHTNQLCSISKCHSNSLLNEISRASLTPESTYIAKPAASWLDDFLVWLSPEAFGCCRKFVNGSYCPPDDQPPCCSPDEGPCGLGGVCKDCTTCFRHSDLQNDRPSTAQFREKLPWFLDALPSADCAKGGHGAYTNSLDLNGYESGIIRASEFRTYHTPVNKQSDYVNSLRAAREFSSKMSDSLKMDIFPYSVFYIFFEQYLDIWTTALVNIAIALGAVFIVCLIITSSFWSSAIILLVLAMIVVDLMLGQWYQVPTLDGVMAILDIQLNAVSVVNLIMSIGIAVEFCVHITHAFSVSHGDRNQRTKEALGTMGASVFSGITLTKLVGVIVLAFAKSE

Click here to download the sequence:
Link to NCBI Protein BLAST