Transcript Information: S_Transcript_280709.p1


Annotated TAIR IDAT1G03475.1
Annotated Gene NameCoproporphyrinogen III oxidase
Annotated Gene Symbol(s)LIN2, HEMF1, ATCPO-I
Annotation TypeOrtholog
Chromosome Positionchr1:869302-871175 | Reverse length=386
E-Value6E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5743813216226
Replicate 20.37035857770409
Replicate 30.39804466367483
Condition 2: 8 Hour
Replicate 10.86938042060254
Replicate 20.37554661985153
Replicate 30.76675710809285
Condition 3: 24 Hour
Replicate 10.20954324691217
Replicate 20.21739867219518
Replicate 30.42339163269979


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280709.p1 GENE.S_Transcript_280709~~S_Transcript_280709.p1 ORF type:complete len:417 (+),score=58.91,Coprogen_oxidas|PF01218.14|3.5e-137 S_Transcript_280709:121-1371(+)
ATGGCGACATCAACACTTTCATCATCACCTTCACCCCTTTCCCTCTCTCTCACTTGTTCATCTAAACTCACTCCCTTCTCTCTTATACCCTCAATCTCTCGCACCACCATTACAACCCAGCAACACCTCTTTCTCAAAAGAAAGTCAAACCCCCAAGCAATTGCAATGCATAAACACCAAACCCCAATATACTCTGACCCATCTCCCCCTTCTCTCCTTCGTCACTCAGACGGGTCCGACCCGTCTTCCTCGATCCGTATCCGGTTCGAGTCCATGATCCGGGATGTCCAAGACAAGGTCTGTGAAGCCATTGAAACCACTGACGGTGGCGCCAAATTCAAGGAGGACACGTGGACACGCCCTGGCGGCGGTGGCGGTATCAGCCGTGTCCTCCAAGACGGCGCCGTTTGGGAGAAAGCAGGCGTCAATGTTTCCGTAGTTTATGGAGAAATGCCGCCAGAAGCTTACCGTTCTGCTACCGGCGACGATCACCGAAAACCGGGCCCGGTCCCTTTCTTTGCCGCCGGGATCAGCTCCGTTCTCCACCCCAAGAACCCCTTTGCCCCCACAATGCACTTCAACTTCCGCTACTTTGAAACAGACACTTCGGCGGTTGATGTTGCCGGAGCTCCGAGGAAGTGGTGGTTCGGGGGTGGCACCGACTTGACTCCGGCGTACCTATTCGAGGAGGATGCTAGGCACTTCCACCGTATACAAAAGAATGCATGTGATAAATATGATCCCATGTTTTACCCCAAGTTCAAGAAATGGTGTGATGAGTATTTCTATATAAAGCATAGAGGGGAAAGGAGAGGGGTAGGGGGGATTTTCTTTGATGACCTTAATGAGTATGATCAAGAAATGTTGCTGAGTTTTGCCACTGAATGTGCTAATTCTGTGGTACCTTCTTACATACCGATTATAGAGAAGAGGAAAGACATGTCTTTTAATGAGAAGCATAAGGCTTGGCAGCAGCTTAGAAGGGGGAGATATGTGGAGTTTAACTTGGTTTACGATCGAGGGACCACATTTGGGCTTCAGACTGGAGGGAGGGTTGAGAGCATTCTTGTTTCGATGCCATTGACGGCTCGTTGGGAGTATGATCATCAACCTGAGCTAGGGACTGAGGAGTGGAAGTTGTTGGATGCTTGTATCAATCCTAAAGAGTGGTGTGAACCTCTGGAGTTTGATGAGATTGTTTGGGATGATTTTTTGTTCTTCAATCTAAGGCAGTGGATTGTTGTTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280709.p1 GENE.S_Transcript_280709~~S_Transcript_280709.p1 ORF type:complete len:417 (+),score=58.91,Coprogen_oxidas|PF01218.14|3.5e-137 S_Transcript_280709:121-1371(+)
MATSTLSSSPSPLSLSLTCSSKLTPFSLIPSISRTTITTQQHLFLKRKSNPQAIAMHKHQTPIYSDPSPPSLLRHSDGSDPSSSIRIRFESMIRDVQDKVCEAIETTDGGAKFKEDTWTRPGGGGGISRVLQDGAVWEKAGVNVSVVYGEMPPEAYRSATGDDHRKPGPVPFFAAGISSVLHPKNPFAPTMHFNFRYFETDTSAVDVAGAPRKWWFGGGTDLTPAYLFEEDARHFHRIQKNACDKYDPMFYPKFKKWCDEYFYIKHRGERRGVGGIFFDDLNEYDQEMLLSFATECANSVVPSYIPIIEKRKDMSFNEKHKAWQQLRRGRYVEFNLVYDRGTTFGLQTGGRVESILVSMPLTARWEYDHQPELGTEEWKLLDACINPKEWCEPLEFDEIVWDDFLFFNLRQWIVVL*

Click here to download the sequence:
Link to NCBI Protein BLAST