Transcript Information: S_Transcript_280735.p1


Annotated TAIR IDAT5G47080.1
Annotated Gene Namecasein kinase II beta chain 1
Annotated Gene Symbol(s)CKB1
Annotation TypeOrtholog
Chromosome Positionchr5:19124969-19126397 | Reverse length=287
E-Value4.1E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.223851545431
Replicate 224.803508757206
Replicate 315.922610656028
Condition 2: 8 Hour
Replicate 128.080638181566
Replicate 227.235293996189
Replicate 327.008900070908
Condition 3: 24 Hour
Replicate 122.387613515205
Replicate 210.839214232166
Replicate 315.509207429233


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280735.p1 GENE.S_Transcript_280735~~S_Transcript_280735.p1 ORF type:complete len:161 (+),score=33.39,CK_II_beta|PF01214.14|3e-20 S_Transcript_280735:440-922(+)
ATGTATAAAGATCGAGGATCGAAAGGGGATATGGGGACAGTGGATCGAAAGAGGATCAACGAAGCGTTGGATAAGCACTTAGAGAGATCATCGCCTTCAACTTCGAAAGGATTGAACGGTAAAGAGAAAGATAGGCTCCCGATTACTAGCGGTGGTACTGGTAAACAACCTTCTGGTCAGAGAGATTCTCGTTCTCTTTCTCTCCCTAAGAATCGTTGTTCCGATGAGGAATCAGAAACTGATAGTGAAGAGTCTGATGTCAGTGGGTCTGATGGTGATGATACATCTTGGATCTCATGGTTCTGCAACTTGCGAGGCAATGAGTTCTTCTGCGAAGTTGATGATGACTACATTCAAGATGATTTTAACTTGTGTGGTTTAAGCAGCCAAGTTCCCTATTATGACTATGCCCTGGATTTAATTTTGGATGTGGAATCCTCACATGGTGAGTTGTCAAAATCTTCTCTTTCCCGTAAGCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280735.p1 GENE.S_Transcript_280735~~S_Transcript_280735.p1 ORF type:complete len:161 (+),score=33.39,CK_II_beta|PF01214.14|3e-20 S_Transcript_280735:440-922(+)
MYKDRGSKGDMGTVDRKRINEALDKHLERSSPSTSKGLNGKEKDRLPITSGGTGKQPSGQRDSRSLSLPKNRCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGELSKSSLSRKL*

Click here to download the sequence:
Link to NCBI Protein BLAST