Transcript Information: S_Transcript_280737.p1


Annotated TAIR IDAT5G47080.1
Annotated Gene Namecasein kinase II beta chain 1
Annotated Gene Symbol(s)CKB1
Annotation TypeOrtholog
Chromosome Positionchr5:19124969-19126397 | Reverse length=287
E-Value4.9E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3706798323598
Replicate 26.1332851279578
Replicate 310.965951184844
Condition 2: 8 Hour
Replicate 110.868538694446
Replicate 211.574624392754
Replicate 39.1353632592777
Condition 3: 24 Hour
Replicate 110.542897437546
Replicate 28.7505064001341
Replicate 37.9853576881063


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280737.p1 GENE.S_Transcript_280737~~S_Transcript_280737.p1 ORF type:complete len:259 (+),score=42.21,CK_II_beta|PF01214.14|1e-62 S_Transcript_280737:440-1216(+)
ATGTATAAAGATCGAGGATCGAAAGGGGATATGGGGACAGTGGATCGAAAGAGGATCAACGAAGCGTTGGATAAGCACTTAGAGAGATCATCGCCTTCAACTTCGAAAGGATTGAACGGTAAAGAGAAAGATAGGCTCCCGATTACTAGCGGTGGTACTGGTAAACAACCTTCTGGTCAGAGAGATTCTCGTTCTCTTTCTCTCCCTAAGAATCGTTGTTCCGATGAGGAATCAGAAACTGATAGTGAAGAGTCTGATGTCAGTGGGTCTGATGGTGATGATACATCTTGGATCTCATGGTTCTGCAACTTGCGAGGCAATGAGTTCTTCTGCGAAGTTGATGATGACTACATTCAAGATGATTTTAACTTGTGTGGTTTAAGCAGCCAAGTTCCCTATTATGACTATGCCCTGGATTTAATTTTGGATGTGGAATCCTCACATGGTGATATGTTTACGGAGGAACAGAATGAATTAGTTGAATCTGCAGCTGAAATGCTGTATGGTTTAATCCATGCTCGATACATACTGACTAGCAAGGGAATGGCTGCAATGCTTGAGAAGTACAAAAACTACGACTTTGGGAGATGTCCCAGGGTTTATTGCTGTGGACAACCTTGCCTTCCAGTTGGGCAATCTGATATTCCTCGCTCAAGCACAGTGAAGATCTACTGTCCTAAATGTGAAGATATTTACTACCCCCGTTCCAAGTACCAAGGCAGTATCCTTTACTTATATTACTTTCTAGTTGTGTTGTTGTTGACTTTAATGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280737.p1 GENE.S_Transcript_280737~~S_Transcript_280737.p1 ORF type:complete len:259 (+),score=42.21,CK_II_beta|PF01214.14|1e-62 S_Transcript_280737:440-1216(+)
MYKDRGSKGDMGTVDRKRINEALDKHLERSSPSTSKGLNGKEKDRLPITSGGTGKQPSGQRDSRSLSLPKNRCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHARYILTSKGMAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGSILYLYYFLVVLLLTLML*

Click here to download the sequence:
Link to NCBI Protein BLAST