Transcript Information: S_Transcript_280752.p1


Annotated TAIR IDAT4G25270.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12937253-12938836 | Reverse length=527
E-Value6E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 11.0374514208335
Replicate 20.84650238096263
Replicate 30.69132478718858
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.13633537516279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280752.p1 GENE.S_Transcript_280752~~S_Transcript_280752.p1 ORF type:3prime_partial len:185 (+),score=12.42,PPR_2|PF13041.2|6.6,PPR_2|PF13041.2|1.7e-05,PPR|PF01535.16|13,PPR|PF01535.16|0.00021 S_Transcript_280752:167-718(+)
ATGTTGCTCCATTTGTCAATAAACTTGCCCAAAAACTCTCATCTTAACCCATCATTCTGCTGGTTTCGTAATGGACTCATCACTCTTACTTCCAGCCAGTCATCGCCATTAAAATCTGCCCATTTTCATTCAGTTCCTTCACCAGCAATCAAAGAATGCAACAACTGCAACAAAAACAAAATTATAACTTTGCATTCTTCAAGAACCAACCATTTTTACAACCCAAGTATTTTATTCCCTGCAGGTTATGCTTCTCTCCTTCGTTCTTGTATTTCCCAAAGAGCAATTGGACCCGTTAAACAGATTCATGCCCAACTTTGCCTAAGTGGGCATGGCTTCAATGTGGGTTTAGCTACAAAAATCATTGATCTTTATTGCAACTGTAATGCCTTAGTTTATGCACACCACCTGTTCGACAAAATTCCTAAAAGAAATCTCTTCCTTTGGAACGTTCTGATTCGTGGGTATGCTTGGGACGGGCCTTATGAAGTTGCTTTATCACTATATTATCAATTGCTTGATTTTGGGCTTACCCCTGATAACTTTACATTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280752.p1 GENE.S_Transcript_280752~~S_Transcript_280752.p1 ORF type:3prime_partial len:185 (+),score=12.42,PPR_2|PF13041.2|6.6,PPR_2|PF13041.2|1.7e-05,PPR|PF01535.16|13,PPR|PF01535.16|0.00021 S_Transcript_280752:167-718(+)
MLLHLSINLPKNSHLNPSFCWFRNGLITLTSSQSSPLKSAHFHSVPSPAIKECNNCNKNKIITLHSSRTNHFYNPSILFPAGYASLLRSCISQRAIGPVKQIHAQLCLSGHGFNVGLATKIIDLYCNCNALVYAHHLFDKIPKRNLFLWNVLIRGYAWDGPYEVALSLYYQLLDFGLTPDNFTF

Click here to download the sequence:
Link to NCBI Protein BLAST