Transcript Information: S_Transcript_2808.p1


Annotated TAIR IDAT4G38350.2
Annotated Gene NamePatched family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17958324-17966846 | Reverse length=1297
E-Value2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9919501852771
Replicate 24.7277406194675
Replicate 35.6645546542488
Condition 2: 8 Hour
Replicate 17.1592381778947
Replicate 27.0311524296284
Replicate 36.0902421728518
Condition 3: 24 Hour
Replicate 13.5888022877405
Replicate 23.0758029996471
Replicate 35.5848812611328


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2808.p1 GENE.S_Transcript_2808~~S_Transcript_2808.p1 ORF type:internal len:140 (+),score=16.42,Patched|PF02460.14|4.8e+02,Patched|PF02460.14|5.3e-15 S_Transcript_2808:1-417(+)
GAAATTTATGCACCTATACTAGTAATTTGGGGAGTTCAAGTTGTTGTCCTTGCTCTATTTGCTGGATTGAGAAATATTTATTCAAGTGCTGTTTTTATTGTCTGCCTAATTATAACATCAAGTTTCTGGAGTTCAGCTATCATTCTGCTTGTTCTAGCAATGATTATGGTGGATCTAATGGTTGTCATGGCAGTCTTGGATATTCAACTCAATGCGGTTTCTGTTGTCAACCTTATCATGTCAATAGGAATTGCTGTGGAGTTTTGTGTGCATATAACGCACGCGTTTTCGGTCAGCCATGGGGATAGGAACCAGCGAACAAAGGAGGCTCTTGGTACCATGGGGGCTTCGGTTTTCAGCGGAATCACACTAACGAAGTTGGTTGGAGTTATTGTCCTTGCATTTGCTAAATCAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2808.p1 GENE.S_Transcript_2808~~S_Transcript_2808.p1 ORF type:internal len:140 (+),score=16.42,Patched|PF02460.14|4.8e+02,Patched|PF02460.14|5.3e-15 S_Transcript_2808:1-417(+)
EIYAPILVIWGVQVVVLALFAGLRNIYSSAVFIVCLIITSSFWSSAIILLVLAMIMVDLMVVMAVLDIQLNAVSVVNLIMSIGIAVEFCVHITHAFSVSHGDRNQRTKEALGTMGASVFSGITLTKLVGVIVLAFAKSE

Click here to download the sequence:
Link to NCBI Protein BLAST