Transcript Information: S_Transcript_28146.p2


Annotated TAIR IDAT1G26800.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9285576-9286190 | Reverse length=204
E-Value3.5E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2592072798836
Replicate 26.8470726212977
Replicate 36.7835351112094
Condition 2: 8 Hour
Replicate 11.9609554314605
Replicate 22.8286245406551
Replicate 32.2050876832739
Condition 3: 24 Hour
Replicate 16.026174756026
Replicate 29.3781289281437
Replicate 35.5082625712323


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28146.p2 GENE.S_Transcript_28146~~S_Transcript_28146.p2 ORF type:complete len:87 (+),score=23.99,zf-RING_2|PF13639.2|1.7e-14,zf-RING_11|PF17123.1|1.6e-09,zf-RING_11|PF17123.1|1.6e+03,zf-rbx1|PF12678.3|5.8e-08,zf-C3HC4|PF00097.21|9.8e-08,zf-C3HC4_2|PF13923.2|1.2e-07,zf-C3HC4_3|PF13920.2|9.1e-07 S_Transcript_28146:524-784(+)
ATGCCAAGTGTTGTGGTTTTAGAGGGCGAAGAAGGGGAGTGTGTGGTTTGCTTAGAGGATTGGGAAAAGGGGATTGCTGTTAAGGAGATGCCTTGCAAACATAGGTTTCATGGTGGGTGTATTGAGAAGTGGTTGAAATTGCACGGTTCATGTCCGGTTTGCCGGTTCGCTATGCCTGTTGAGGAAGAAGGGGAGGTAAGACAGGGGAGGAGAGAGAAGAAAGTGGTGAGAGAAGAAGAATTCAAAGAGAGATTTGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28146.p2 GENE.S_Transcript_28146~~S_Transcript_28146.p2 ORF type:complete len:87 (+),score=23.99,zf-RING_2|PF13639.2|1.7e-14,zf-RING_11|PF17123.1|1.6e-09,zf-RING_11|PF17123.1|1.6e+03,zf-rbx1|PF12678.3|5.8e-08,zf-C3HC4|PF00097.21|9.8e-08,zf-C3HC4_2|PF13923.2|1.2e-07,zf-C3HC4_3|PF13920.2|9.1e-07 S_Transcript_28146:524-784(+)
MPSVVVLEGEEGECVVCLEDWEKGIAVKEMPCKHRFHGGCIEKWLKLHGSCPVCRFAMPVEEEGEVRQGRREKKVVREEEFKERFG*

Click here to download the sequence:
Link to NCBI Protein BLAST