Transcript Information: S_Transcript_28172.p1


Annotated TAIR IDAT5G13560.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4361579-4366318 | Reverse length=679
E-Value5.6E-278
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.626382094951
Replicate 229.976967363651
Replicate 331.781991757537
Condition 2: 8 Hour
Replicate 140.902285966975
Replicate 243.95757082652
Replicate 341.570584201808
Condition 3: 24 Hour
Replicate 132.94323571788
Replicate 229.864466206021
Replicate 332.644637268115


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28172.p1 GENE.S_Transcript_28172~~S_Transcript_28172.p1 ORF type:complete len:683 (+),score=200.73 S_Transcript_28172:205-2253(+)
ATGTCGTGGATAAGAACAGCGGTGAGCAAAGCAGTGGAGGTAGGGAACAAGAACAACATCACTCGCACCGTCAAAAACTACGCCGATTCTGTTGTTCAACAGGCCGGCCAAGCCGTTGCTGGTGGTGCCAAACTCCTCCAGGACCGCATTGGAGCTCGGAATCAGAAAAGCTTCAAGCATGCTGTCAAGAGACTGGAAGAGGCTGCCATCAGTTGTAGGGGGCCAGAAAGAGTCCAATTATTACGAAGATGGTTGATTTTGCTCAAAGAAATTGAGAAATTATCTGGAGATTCAGCTGAAAATACTGTACAAACCCTAGAGGAACATCTTGGCTCCGATGAGATGAAGGATAACACAAAGAAGTCATCTTTAGTTCTGTTCTATGATTCTGATGACCAGAGTGAACCAATGAACTTTCGGGATGTGTTTCTTCACAGTCAGGCTCTTGAGGGGATTACCCTATCAATGATACTTGATGCACCAAGCGGGGAAGAGGTCTCCTTACTTTTAGAGATGTTTGGGTTCTGCCTCACTGGTGGGAAAGAAGTCCATCATGCTATAATCAGTAGTATACAAGATCTGGCAAAAGTTTTCTCAAGCTATGATGATGAAGTGCTGGTAAAAAGAGAAGAGCTGCTCCAGTTTGCTCAAGGTGCCATTTCAGGGCTGAAAATAAATGCTGAAATACTAAGAGTAGATAATCAAGCTTCAAATCTTAGGAAAAGACTCGAGGAAATGAGAGTTACTTCTAAGGCTTCAAGTGAAGGTCATGAAAATCCTGAAAGAGATTCTACTACTGCCACAATAGAGGGCTTGAAAGAAGCACTTGCACAAATTCGAATTTGTTCTACATTGGAGGGGTTGTTGCTGAAGAAAAAGATGTTGCACAATGGGGACACCCCTGAAATTCATGCTCAAAAGGTCGATAAGTTGCAAGTCCTATCTGAGTCTCTTGCTAATTCTTCAGCTAAAGCTGAGAAACGCATATTAGATACCAGATCCCAAAGAGAGGAGGCACTCAAATTTCGTGAATCCAAGGAAAATGAAGTTGGCGAGATAGAGAAGGAAATAGGAGTTGAGATTGCTGGACTTGAGAAGCAAAGGGATGAACTTGAAGCTGAACTGAAAAAGGTCAACATTTCTCTGGCTGCTGCTTGCAAACGTCTTCAAATTGCCAGGGAAGAAAGAGACCAATTTGATGAGGCTAACAATCAAATTCTAGAGCACTTGAAAAACAAGGAGGAAGAGCTGTCGAAATCTGTCGGTTCATGCAAAGCCGAAGCTGATGTCATAAAGACATGGATAAATTTCCTTGAAGATACTTGGGCTCTTCAATGCACATTCACTGACGCAAAAGATAGGCAAGCAAAGGATGAATTGGAGAGGCATGAAAACTTATTTGTAGACTTGGCCATTAATCTTCTCTCTGCATATCAGAAAGAGCTAGAACCTTCAATTGGTCGCATCAGGCAATATGTGGATAACCTGAAGGCTTTAAATGCAGGGTCAGAGACGGCATCCCAAGGTGATTCTGAAGATTCAAAAATGTCAAATCCTAGAAGAAACTTGGAGGAGGAGTACCTGGATTATGAGGCCAAGATTGTAACCACTTTCAGTGTTGTAGATAACATGAAAGAGCATATGTATTCTCAGCAAGGAAGAATCCCAAGGAAAGAAGATTCAATGGTTAAGGAGCTATTTGACAACATTGAAAAGTTGAGAATGGAATTTGAATCAATTGAAAGACCCACTCTGGAGATTGAATCCCCAGATAGGGAGCCAGAGATTCCAACCAGTGAGAGGCCACAGGAAGTTCTTCCTACATCATCCGTAGGGTCTGTTGGAGATGTGAAAATGGAGAAGGGGGAGAATGCGGAACCATCACCGCAAAAAGCGGCACAGGTTCTCGACCATGAAGCAGAGTTGGCTAAGCTGGAGTCTGAGTTTGGGAAGCTCGGTGAAGACTATGCATCTGAGGAGATAGGTGGCTGGGAATTTGATGAGCTTGAGAAAGAACTGGCATCCAGTGGGCCAGAAAAAGGTAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28172.p1 GENE.S_Transcript_28172~~S_Transcript_28172.p1 ORF type:complete len:683 (+),score=200.73 S_Transcript_28172:205-2253(+)
MSWIRTAVSKAVEVGNKNNITRTVKNYADSVVQQAGQAVAGGAKLLQDRIGARNQKSFKHAVKRLEEAAISCRGPERVQLLRRWLILLKEIEKLSGDSAENTVQTLEEHLGSDEMKDNTKKSSLVLFYDSDDQSEPMNFRDVFLHSQALEGITLSMILDAPSGEEVSLLLEMFGFCLTGGKEVHHAIISSIQDLAKVFSSYDDEVLVKREELLQFAQGAISGLKINAEILRVDNQASNLRKRLEEMRVTSKASSEGHENPERDSTTATIEGLKEALAQIRICSTLEGLLLKKKMLHNGDTPEIHAQKVDKLQVLSESLANSSAKAEKRILDTRSQREEALKFRESKENEVGEIEKEIGVEIAGLEKQRDELEAELKKVNISLAAACKRLQIAREERDQFDEANNQILEHLKNKEEELSKSVGSCKAEADVIKTWINFLEDTWALQCTFTDAKDRQAKDELERHENLFVDLAINLLSAYQKELEPSIGRIRQYVDNLKALNAGSETASQGDSEDSKMSNPRRNLEEEYLDYEAKIVTTFSVVDNMKEHMYSQQGRIPRKEDSMVKELFDNIEKLRMEFESIERPTLEIESPDREPEIPTSERPQEVLPTSSVGSVGDVKMEKGENAEPSPQKAAQVLDHEAELAKLESEFGKLGEDYASEEIGGWEFDELEKELASSGPEKGK*

Click here to download the sequence:
Link to NCBI Protein BLAST