Transcript Information: S_Transcript_282006.p1


Annotated TAIR IDAT5G11500.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF814 (InterPro:IPR008532); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3676747-3678946 | Forward length=215
E-Value7.8E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55443752573293
Replicate 20.22982072455745
Replicate 31.152671005225
Condition 2: 8 Hour
Replicate 10.22213948247014
Replicate 21.1652004499858
Replicate 31.5542805545299
Condition 3: 24 Hour
Replicate 10.91020347877476
Replicate 20.23608137058695
Replicate 30.26272962921996


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_282006.p1 GENE.S_Transcript_282006~~S_Transcript_282006.p1 ORF type:5prime_partial len:96 (+),score=16.16 S_Transcript_282006:3-290(+)
CACAAGGGCCAGACAATGGATTCCATGTCTGAAGGTTTATTGGAGGATTGTGCGCAGCTGGTTAAAGCAAATTCCATTCAGGGTAAGTACCAAAAACCTTCATGCTTTGCTTGTTGTGTAGACCAAGAAAAGCATGCACGAGTGATGATGACACTGAAAAGGCTTGATAGTCTTGGGGCCCATTTGGCCGAGATTCTTAGAGATTCTGTATCGATCTTTCACATCTCTCCTACCCCAGTCCCCTCCTCCTCCCTTTATTCCTCCAATTTACAGTTTTCTAGAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_282006.p1 GENE.S_Transcript_282006~~S_Transcript_282006.p1 ORF type:5prime_partial len:96 (+),score=16.16 S_Transcript_282006:3-290(+)
HKGQTMDSMSEGLLEDCAQLVKANSIQGKYQKPSCFACCVDQEKHARVMMTLKRLDSLGAHLAEILRDSVSIFHISPTPVPSSSLYSSNLQFSRN*

Click here to download the sequence:
Link to NCBI Protein BLAST