Transcript Information: S_Transcript_282313.p1


Annotated TAIR IDAT5G62170.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 381 Blast hits to 359 proteins in 81 species: Archae - 0; Bacteria - 16; Metazoa - 101; Fungi - 21; Plants - 99; Viruses - 3; Other Eukaryotes - 141 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24973115-24975475 | Reverse length=703
E-Value3.3E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4935868040152
Replicate 20.5346849510112
Replicate 30.54104965551379
Condition 2: 8 Hour
Replicate 10.68001882388817
Replicate 20.37096177591383
Replicate 31.3322404753113
Condition 3: 24 Hour
Replicate 10.027863371799227
Replicate 20.37580299807719
Replicate 30.80427437516314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_282313.p1 GENE.S_Transcript_282313~~S_Transcript_282313.p1 ORF type:5prime_partial len:784 (+),score=134.82,DUF4378|PF14309.2|2.8e-29,VARLMGL|PF14383.2|3.9e-10 S_Transcript_282313:1-2352(+)
CCCTCCTCCAAGAAAAGAGGGGCGAGTGGCGGCGGCAGTGGTGGTGGTGGGGGTGTAAAGGGAGGAGAGCGACAAACAGCACCAGCGGCTACAGCGACAGTGGCGGCAGCAGCAGCAACAGCAGGAGGGTGCATGAATGCTGTACTTCATTTGTTTGATTTCAATCACTTCCAGCTATGCTTGCACCCTCATGACAATACTAGTAGTAGTACTATTACTCCTGTTCAGCCCACTACTTGTAACCATGACCCCACCTCTCCAAAAGGAGTGGAAGCACCAAGGAACAGCTTGGAGACTGAAGATGAGATGTTCATTGGACAAGCTTCATTGGCTTCTATCACTGAGGATGAAAAGGATGACATATCACACATTCCTATGGCTATTGAGATCAAACCAAATGGTAGAAGAGACACAAGGTTGAAGCAAGTCCAAGCACCAAGGGCCAAAATGGAGGACTTGTCATCAGAAAGCACCGACTCCCCAGCAAGTGCAAGGACCCCGAACGTGGTGGCGAGGCTGATGGGGCTCGACATCCTCCCCCAATCCAACACCACAACACCGAGATCCTCGAGCTGTCAGGTCTTTCGTAGCCCAAGAGTGTCAGTGGCTGCTTCCACACCACCAAGTACTAGTAAAACCAAGAAGACCAAAACAATAACAATAACAAGAAGCTCCTACGACAACGATGTCCCTGGGCCTCGGTCACTGCCCGAGACACCAAGGCTATCGTCGTCTACATTGACAAGGAGGAGATCAACGGATATCGTTGATCACCACCGGCTGTCGCTCCAGATCAACAACAAGGAGAACAGCATTGTCAAGGAGATGGAGTCATCTCGGCCTTCGTGTTCGGCCATTAGTACTAAGAGGAGGGAGGGGTTCAGGAATAGTAGTACTAATTATGAAGAGGGGAGTAGAAGTCCTGGTTATTATGCAAGGCAGATTATGAAACAGGTTAGAGAAACTGTCAGTAGGAGAGTTGGCCTTGATATTACAAACACAGTTGGAAATAGAGAGATTAGAAGAGACGAACATCTCTTAACAACCACCACCACCAATAAACCAAAAAAGTCTTCTAAGAAGGAATCAAGTCCCGGTAAAAACTTACCACACACACATTCAATAGCACAGTCTCCATCACCAAGGTTCAAAACCTGTGAACCAGTCTCAGAAAACCAACCAGTTTCGGAACATAAAGAGGCAGAAGAACCTGTTGAGGTGCTTTCGAAGGTGGTAGATAAGTTGATAACGAAATCATTAGAAGATGAAAAAGTATCATTGAAGAAGTTTTCTGAGAAGCCTGAAGAGAAGTTGAATATGAACAAGTTTGAAACGCCTAAATCATGCTCGAAGAAGTTGCCTCCAAAGTCTTTTGATTCTATCAGGAACAAGAAAGACGAACAGTTTGTTGTTCGTCCTCCAACGGACAAGAAAACCAAGAAGACACCATTGTCAAGTGACCTCCTACATGGGACAGTGCCTTCCCTTGTCTCTCTCAAGAAGGATTCATCTTCTCCTACAAAATTACTTGACAAACAGGGAGTCTCGTCAAAGTTTCAACCATTGAAAAGCTCAACTAGCACTAGCACTAGGACCAGCACCAACACCACAGCACAGTTATCTCGGAGTCCGAGCCAACGGTACGAGAGAGGGCAAATAGAAGCAACGCATACGCCTGCCGTCCAAGAAGTGAAAATTAGGAGTAGCAGCAAGGATTCAAGTTCCGTAGCTGAGTTTCAGTACATCAGTAGAATACTGAAACGTACTGGAATTGACAGAGATACCCCTGTTTCCTTCACTAGATGGTTTTCACCTTCCCACCCTTTAAACCCATCAATTTACCACAATCTAGAGGCTGCCCATTATGCCCCTACAACAAAAAGTGATACTACTACTTGTTGTTCACCCCATGACCAATTAGGCCCAGCAATTAACAGAAAGCTAATTTTTCATCTTGTGGATGAGATTTTGGCTGATATTTTAAAACCTTACATTAAACTTAAACCATGGTTATTGGGATGTTCCTCAAGGCAAGATAGTTATTATCATCATCAACAGCAGCAACAACAAATAAATGGGTTTCAATTGGTGAAAACGTTATGCACAAGGATACGGAGCATCCCTAGCGCGAATTGTGAAACTCTTCAAGACATTGATTCCCTTGTAGAGAAGGATTTGCCTAGATTCGGAGCACAAAGCAATATGATCGCATTTGAAGAGGAAGGAGAAGCAATTGTTTCAGAGATTGAATGTGACATTGTTGATTCATTAGTCCAAGAAATAGTTGTGCTTGGTCTAGGTAACCGTTACATTGCCATGCATAGATATGTGACTAGTAGTATTAGAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_282313.p1 GENE.S_Transcript_282313~~S_Transcript_282313.p1 ORF type:5prime_partial len:784 (+),score=134.82,DUF4378|PF14309.2|2.8e-29,VARLMGL|PF14383.2|3.9e-10 S_Transcript_282313:1-2352(+)
PSSKKRGASGGGSGGGGGVKGGERQTAPAATATVAAAAATAGGCMNAVLHLFDFNHFQLCLHPHDNTSSSTITPVQPTTCNHDPTSPKGVEAPRNSLETEDEMFIGQASLASITEDEKDDISHIPMAIEIKPNGRRDTRLKQVQAPRAKMEDLSSESTDSPASARTPNVVARLMGLDILPQSNTTTPRSSSCQVFRSPRVSVAASTPPSTSKTKKTKTITITRSSYDNDVPGPRSLPETPRLSSSTLTRRRSTDIVDHHRLSLQINNKENSIVKEMESSRPSCSAISTKRREGFRNSSTNYEEGSRSPGYYARQIMKQVRETVSRRVGLDITNTVGNREIRRDEHLLTTTTTNKPKKSSKKESSPGKNLPHTHSIAQSPSPRFKTCEPVSENQPVSEHKEAEEPVEVLSKVVDKLITKSLEDEKVSLKKFSEKPEEKLNMNKFETPKSCSKKLPPKSFDSIRNKKDEQFVVRPPTDKKTKKTPLSSDLLHGTVPSLVSLKKDSSSPTKLLDKQGVSSKFQPLKSSTSTSTRTSTNTTAQLSRSPSQRYERGQIEATHTPAVQEVKIRSSSKDSSSVAEFQYISRILKRTGIDRDTPVSFTRWFSPSHPLNPSIYHNLEAAHYAPTTKSDTTTCCSPHDQLGPAINRKLIFHLVDEILADILKPYIKLKPWLLGCSSRQDSYYHHQQQQQQINGFQLVKTLCTRIRSIPSANCETLQDIDSLVEKDLPRFGAQSNMIAFEEEGEAIVSEIECDIVDSLVQEIVVLGLGNRYIAMHRYVTSSIRE*

Click here to download the sequence:
Link to NCBI Protein BLAST