Transcript Information: S_Transcript_28248.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9864039454587
Replicate 29.3606002732259
Replicate 38.3452079550441
Condition 2: 8 Hour
Replicate 111.234448332638
Replicate 211.86991781073
Replicate 310.908580524092
Condition 3: 24 Hour
Replicate 111.261520369563
Replicate 210.042008704101
Replicate 310.345071835024


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28248.p1 GENE.S_Transcript_28248~~S_Transcript_28248.p1 ORF type:internal len:1063 (+),score=213.04,DUF2450|PF10475.5|1.7e-88,DUF2451|PF10474.5|2.3e+03,DUF2451|PF10474.5|6.5e-24 S_Transcript_28248:1-3186(+)
GTGAGACACAGCAAACCAAACCAAGATCAACAGAGCAACCAGAAAACAAAAGAGAAAAAAAAAAAAAAAAACCCAAATAAATCAAATCAATTTTTTCCCCTCAGATCTAATTCTCTCTCCTCTTTCACCAACAACAGCAACATTCAAACAAAAAACTTCAACCCCAATGAAATTCACAATGATGATGATGATGGCACACTCTGTCTGGTAGATGATATAGATGAAATGCAGCCAGGAACACCATCGCCATTTGGACAATACCTTTTGAGTCCACTCCCCTTCCTTTACAGCGTCAATGGCGAACTGAACAGTAATAGCGAGGGTTTCGACAGTTCTAGGGTTTTGTTTTTGGCTTCTTTGTGGTTGTTTCAAGGTGGTGGTTCTATGGATTTGTCCAAGGTCGGTGAAAAGATTCTTAGCTCCGTTCGCTCTGCTCGTTCTCTCGGTCTCCTTCCGTCCTCTTCTTCCGATCGTCCTGAGGTTCCTGCTAGGGCACAAGCAGCCGCGGCTGTTGCTAGGGCTCTTGCAACCCTTCCTCCTGACCAGAGGCTCAGTCTCCCATCAAGTTCTGCAGAATTAAGTTCTATATATGGAAGCAGGCCTCATGGTCCAATCGTTGAAGAATTAGAGGAAAACTTTTATGAAGAGAACTTCGATCCAGTCATGTACGTTCTGGAGAATATTCCATCAGAGGAAGAAGAATTGGAATATTTTGAAAATAAGGCCACCATTAGATTAGCCCAACTGGATAGAATATCTGAACGTTTATCCAGCCATGTCATGGAGCATCATGAAGAAATGGTTAAGGGGATGCAATTGGTAAGAGAGCTGGAAAGGGACCTGAAGATCGCCACGGTTATTTGCATGAATGGAAGGAGGCACCTGACATCTTCAATGCATGAGGTTTCAAGGGATCTTATTGTTACAACAAATTCAAAAAAGAAACAGGCTCTTCTGGACCTGCTTCCAGTTTTAACCGAACTACGTCATGCATTGAATATGCAGAAAGAGCTTGAATCACTTGTTGAGGAAGGGAAATACTGTAAGGCGTTTCAAGTGTTCTCTGAATACTTGCAGCTTCTAGATGCTCTTTCAGAGCTTTCAGCTGCGCAGGAAATGAGCCGCAGTGTTGAGGTTTGGCTGGAGAACACCCTTCAGAAGCTGGATTCCTTATTGTTACAAGTTTGCCAGGTTTTCAAAGAGGAAAAATATATAACTGTAGTAGATGCGTATGCATTAATCGGGGACGTTTCTGGTCTTGCGGAAAAGATACAGAGCTTTTTTATGCAAGAAGTTCTTTCAGAGACCCATTCTGCACTGAAGACTGCATTGCAAGAGGATCAGGATTCACAGACTTTTCAAATTAGTTCCAGACTTACATACAGCGACTTGTGCTTCCAAATTCCAGAATCTAAGTTCAGACATTGTTTACTAAGAACATTAGCTGTACTTTTTGGGTTGATGTGTTCATATTATGCAATATTGAGCTTTCAGCCAGAGAACAAGAGGCCAGGCGAGGTTGAGCAAACGAATATTGCGTCAGTAAGTTGTGAGTCTAGAGTGGATAGTGGATCAGAAGCAGCTGCTCCTGGTGAAAAGGAGCTTTTGTCTTCTGCTGGTGATTGTGCAACAAGAACCTCATCAGCAGATAATTCAGGAACTAATGGCTCCAATATTGTGAACGCGTTTGATCAGTCACTGGACGATAGTGCTGCTTCCAGCAGTGGATCTCCATGGTATGAGCTGCGAAGAGATGCTACAGCTCTTGTTTCACAGTCTCTACAGAGGGGACGCAAAAATCTTTGGCAGCTTACAACAAGTCGTGTGTCAGTATTGCTTTCATCATCTGCATATTGTTCTACAAGTATTCATCAGTTCCTCAGAAATTATGAGGATCTGAACATATTTATTTTGGCTGGGGAAGCTTTTTGTGGAACAGAAGCTGTGGAGTTCAGGAATAAGTTGAAGAGTGCATGTGAACAATACTACAGTAATTTTCATAAACAGAATATACACGCTCTGAAGATGGTTCTGGAAAGGGAATGTTGGCAGAAACTTCCACCAGATGCAATTGAAGTAGTGAGTTTTGCCGGCCTTGTTGGTGATGGCGCACCCCTGATTGCGTCGTCAGATGTTGGCTTGATGAGTAGTCAATTACACTCAAACAAACTGGTCTATCCTGCTGAAAGTGATACAAAAAAGGGTGGATTTTCTCACTGGCTTACAAGTGGAAACCCCTTCTCGTTGAAAGTTTCTTCTCCTACAAACGGTCATATATCATCCCCCTTTGCTGATGGCCCATCTGGTTCTGGCGAACCTAACGGTAGCCCCAAAGACCATCAAATTGACAAATCATCACCCAGAAATAACAATGTGAATCATACAAATGGTAACACTCCTAACCTAGAAGATGAAAATGAAGATCTTCTTGCTGATTTCATTGATGAAGATAGTCAACTCCCTAGCCGGATTTCTAAACCCAGTTCTCAACGGAATCACTCATCACAGTGGAGAGATGATGAGGCCACAGCACAAACAGGATCTTCGCTTTGCCTTTTAAGGTTCATGGACAAATATGCAAGGCTTATGCAGAAGTTAGGAATGGTTAATGTTGAGCTCTTCAAGGGTTTATGCCAGTTGTTCGAGATATATTATTATTTTGTGTTTGATGCTTTTGGCCATCAAGACAGCCATGCAAGTAGTAAAGTTGCTACTGATTCTCTGAACTATCGTCTGAAGACTGCTGTTAACAGAATAACGCAGGACTGTGAACAATGGTTGAAGCCCCAGCTGGTTACATCTTCATCGTCTGCTTCTCTGAATTCATCTTTCAAGCACATGGATCCTACACCTACAAGTCCACCTGGCAGTAATTTTGGTCTCAAGGAAACATGTGCTGCTGTTGATACAGTATCTCATATTGCTCGAATTTTGCATAGATCAAAGCCCCATCTTCAATCAATGCTATTGCAAAATAACCCCGCAGTTGTTGAAGATTTTTTTGTGAATCTGGTTGATTCAGTGCCAGACCTTATAGAGCACATTCATAGAACAACTGCAAAATCACTTCTCCATATCAATGGGTATATTGATCGTATCGCTAGTTCTAAGTGGGAAGTCAAAGAGCTTGGAATGGAGCACAATGGTTATGTTGATCTGCTTTTGGGAGAATTCAAACATTACAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28248.p1 GENE.S_Transcript_28248~~S_Transcript_28248.p1 ORF type:internal len:1063 (+),score=213.04,DUF2450|PF10475.5|1.7e-88,DUF2451|PF10474.5|2.3e+03,DUF2451|PF10474.5|6.5e-24 S_Transcript_28248:1-3186(+)
VRHSKPNQDQQSNQKTKEKKKKKNPNKSNQFFPLRSNSLSSFTNNSNIQTKNFNPNEIHNDDDDGTLCLVDDIDEMQPGTPSPFGQYLLSPLPFLYSVNGELNSNSEGFDSSRVLFLASLWLFQGGGSMDLSKVGEKILSSVRSARSLGLLPSSSSDRPEVPARAQAAAAVARALATLPPDQRLSLPSSSAELSSIYGSRPHGPIVEELEENFYEENFDPVMYVLENIPSEEEELEYFENKATIRLAQLDRISERLSSHVMEHHEEMVKGMQLVRELERDLKIATVICMNGRRHLTSSMHEVSRDLIVTTNSKKKQALLDLLPVLTELRHALNMQKELESLVEEGKYCKAFQVFSEYLQLLDALSELSAAQEMSRSVEVWLENTLQKLDSLLLQVCQVFKEEKYITVVDAYALIGDVSGLAEKIQSFFMQEVLSETHSALKTALQEDQDSQTFQISSRLTYSDLCFQIPESKFRHCLLRTLAVLFGLMCSYYAILSFQPENKRPGEVEQTNIASVSCESRVDSGSEAAAPGEKELLSSAGDCATRTSSADNSGTNGSNIVNAFDQSLDDSAASSSGSPWYELRRDATALVSQSLQRGRKNLWQLTTSRVSVLLSSSAYCSTSIHQFLRNYEDLNIFILAGEAFCGTEAVEFRNKLKSACEQYYSNFHKQNIHALKMVLERECWQKLPPDAIEVVSFAGLVGDGAPLIASSDVGLMSSQLHSNKLVYPAESDTKKGGFSHWLTSGNPFSLKVSSPTNGHISSPFADGPSGSGEPNGSPKDHQIDKSSPRNNNVNHTNGNTPNLEDENEDLLADFIDEDSQLPSRISKPSSQRNHSSQWRDDEATAQTGSSLCLLRFMDKYARLMQKLGMVNVELFKGLCQLFEIYYYFVFDAFGHQDSHASSKVATDSLNYRLKTAVNRITQDCEQWLKPQLVTSSSSASLNSSFKHMDPTPTSPPGSNFGLKETCAAVDTVSHIARILHRSKPHLQSMLLQNNPAVVEDFFVNLVDSVPDLIEHIHRTTAKSLLHINGYIDRIASSKWEVKELGMEHNGYVDLLLGEFKHYR

Click here to download the sequence:
Link to NCBI Protein BLAST