Transcript Information: S_Transcript_282519.p1


Annotated TAIR IDAT5G57070.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23096221-23097948 | Forward length=575
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8859607174537
Replicate 25.0379598202199
Replicate 34.3565518307718
Condition 2: 8 Hour
Replicate 13.5262456429905
Replicate 25.8131575205589
Replicate 33.3568263944853
Condition 3: 24 Hour
Replicate 11.7200695661885
Replicate 23.7475593945141
Replicate 32.9789816226515


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_282519.p1 GENE.S_Transcript_282519~~S_Transcript_282519.p1 ORF type:3prime_partial len:127 (-),score=11.06 S_Transcript_282519:3-380(-)
ATGGAGGATGGCGAATCACCACCGTTTTGGCAGCCACCACCCACCGTGAGACGGCGGCTCTCATCATCATTCTTAAACTCTTCATCGGTCATGATTGTATTGCCCTCACTTTGTATTCTCTTTTTTGTTTTCATTGTTGTCCCTTCTATCCCCAAGTTTCTACCCCAATTCCCAAACAGTCCCCAAGCTCAAACCCCAGTATTTCAAACGTCCACCACCACCACCAGTCATAAACCGATTCCAGTGAAGAAAGGGTGGGATACCCTCAATGTGGTGCTCGTCGTTTTTGCTATTTTGTGCGGCGTTTTCGCCCGTCTAAACGACGACGTTTCGAGGAATGATGTTCGTTATCAACATCAACAACAGCAACAACTACAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_282519.p1 GENE.S_Transcript_282519~~S_Transcript_282519.p1 ORF type:3prime_partial len:127 (-),score=11.06 S_Transcript_282519:3-380(-)
MEDGESPPFWQPPPTVRRRLSSSFLNSSSVMIVLPSLCILFFVFIVVPSIPKFLPQFPNSPQAQTPVFQTSTTTTSHKPIPVKKGWDTLNVVLVVFAILCGVFARLNDDVSRNDVRYQHQQQQQLQ

Click here to download the sequence:
Link to NCBI Protein BLAST