Transcript Information: S_Transcript_282522.p1


Annotated TAIR IDAT5G57070.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23096221-23097948 | Forward length=575
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91768969776484
Replicate 21.0143811290811
Replicate 30.84794188890118
Condition 2: 8 Hour
Replicate 10.65365181048683
Replicate 21.1143066372278
Replicate 30.65335931356265
Condition 3: 24 Hour
Replicate 10.66957497289178
Replicate 20.78151074401198
Replicate 30.6764532982215


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_282522.p1 GENE.S_Transcript_282522~~S_Transcript_282522.p1 ORF type:5prime_partial len:261 (-),score=35.19 S_Transcript_282522:55-837(-)
GGAATGCATCATCATCATCATCGGTGTAGCGCGTGTTCACAGCAATGGTATGGGTATCAGGAGCAGAGGATCTACGCACCTTCGCCGCCACCGGTGACCGGGGTCTCCCGGTTGAGGAGGACTGTCAGTGAAATGCCGCCAGCTCAGGGGAATGTCTGGGATACCGGGAATGACCGGTTGAGATTCTACGACGATTTTGACGTCAGTAAGTACTATTCCTCCACCAATATGAGCTTCAACCACCAACAGCAGTATGAGAACCTCAACCACCAAAACTATGTTCATAATGTGGAGGTCGAACCGGAACCGGAACCGGAGTCGCAGCCAGAAGTGAACCGGCCCGAACCGGAGATAAATAACGGTGATGATCCGGTTCAGGATATTCCGGTGGACAATTTTGTCCTCGAGGCAACAGAGGAATTGCCATCTGAATGTCCTCCCTCTCCTCCTCCCACTCCTCCACCACGAACGGCGGCGCAGCCACCACCACCTCCGCCGCCGCCTCCTTCCAGTTTTAGTAACAAGAAACCTAAACGAACTTTCCAATCCATTCCTCGCAAAAATCACGCGGCACCTCCACCGCCTCCTCCTCCACCACCTCCGCCTCAAACTCCGCCGCGTACTGCGGCGAGCAATGGATGGGGAGAGAAGAAGAAGAGTTCTCGGAAGAGAATCAACGCCACAACAAAGGAGATCGCAAACGCCATAGCTTCGCTTTACAGCAAAAAAACGAAAACGAAAGCAAAAATCAATCCGAAACTCCGAAGATTCATTCGCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_282522.p1 GENE.S_Transcript_282522~~S_Transcript_282522.p1 ORF type:5prime_partial len:261 (-),score=35.19 S_Transcript_282522:55-837(-)
GMHHHHHRCSACSQQWYGYQEQRIYAPSPPPVTGVSRLRRTVSEMPPAQGNVWDTGNDRLRFYDDFDVSKYYSSTNMSFNHQQQYENLNHQNYVHNVEVEPEPEPESQPEVNRPEPEINNGDDPVQDIPVDNFVLEATEELPSECPPSPPPTPPPRTAAQPPPPPPPPPSSFSNKKPKRTFQSIPRKNHAAPPPPPPPPPPPQTPPRTAASNGWGEKKKSSRKRINATTKEIANAIASLYSKKTKTKAKINPKLRRFIRN*

Click here to download the sequence:
Link to NCBI Protein BLAST