Transcript Information: S_Transcript_282729.p1


Annotated TAIR IDAT5G20635.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6979314-6981767 | Reverse length=251
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9209391599588
Replicate 21.2107628415709
Replicate 30.674734246961
Condition 2: 8 Hour
Replicate 11.4303615456614
Replicate 21.6369645346141
Replicate 32.209569568809
Condition 3: 24 Hour
Replicate 10.53280203635596
Replicate 21.2437457572386
Replicate 30.76896476844866


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_282729.p1 GENE.S_Transcript_282729~~S_Transcript_282729.p1 ORF type:complete len:164 (+),score=20.30,G-gamma|PF00631.18|9.6e-09,G-gamma|PF00631.18|1.2e+04 S_Transcript_282729:376-867(+)
ATGGCGGACCAGCCGAGGCCTAAGTCGCCACCAGGCTATGGAGACTTATTTGCCAAAAGACGCCAACATGCTAAGCTTCAGGTCTTGGAACGAGAGATTGGTTTTCTCCAGGAGGAGTTGAAGTCACTTGAGAGTGTTCAACCTACTTCTAGGTGCTGCAAAGAGGTCAATGAATATGTAGCAACAAAGCCAGAACCCTTCTTATCTGTAAATCAGATGTCTCCTGAGTCGGACTGTTGCTGGAGAAGAAGCAGTGGTTGCTGCCAGTCAAGTGGTGCACAACGTCAGCAAATGGAAAGGAAAGGCTGTTGTTGTTGTTGCTGCTGCTCGAGGAACAACTGCTGTCCAAACTGTTGCAGCTTGCAAACTTGCGCATGTTTTCATCCGAATTGCAAGTGCTGCTCATTCAAATTGCCTTGCTCTAGTAATTGTCTTAGTAAGGTAAAGCTTTGCCCCAACTGTTTACCAAGTTGTTGCGGGTCCTGCTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_282729.p1 GENE.S_Transcript_282729~~S_Transcript_282729.p1 ORF type:complete len:164 (+),score=20.30,G-gamma|PF00631.18|9.6e-09,G-gamma|PF00631.18|1.2e+04 S_Transcript_282729:376-867(+)
MADQPRPKSPPGYGDLFAKRRQHAKLQVLEREIGFLQEELKSLESVQPTSRCCKEVNEYVATKPEPFLSVNQMSPESDCCWRRSSGCCQSSGAQRQQMERKGCCCCCCCSRNNCCPNCCSLQTCACFHPNCKCCSFKLPCSSNCLSKVKLCPNCLPSCCGSCC*

Click here to download the sequence:
Link to NCBI Protein BLAST