Transcript Information: S_Transcript_28328.p1


Annotated TAIR IDAT3G12010.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Colon cancer-associated Mic1-like (InterPro:IPR009755); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3821337-3825537 | Forward length=682
E-Value5.3E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.133908053295
Replicate 216.517437881096
Replicate 315.344158112566
Condition 2: 8 Hour
Replicate 117.627842802469
Replicate 218.372579998485
Replicate 319.826030299257
Condition 3: 24 Hour
Replicate 117.088336278932
Replicate 216.419078547918
Replicate 316.068883129066


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28328.p1 GENE.S_Transcript_28328~~S_Transcript_28328.p1 ORF type:complete len:744 (+),score=130.04,Mic1|PF07035.8|6e+03,Mic1|PF07035.8|2.6e-42 S_Transcript_28328:709-2940(+)
ATGCATAGTGAAGCATCAAGTTCACAGCCCAGCATGGGCTTAAGTGGATCAGGTGCTCTATCTCATGCTTATATCCAGTATCCACCTTTGACATGCAGCATCCCTGGGTCAAAAGGCTTTTTCTATGACGATGGGAATAAGTTATTGCTGTCTCCAACATCTGATCAGGTGTTCTCGTGGAAAGTTGCACCTTTCGATCCTCATGTCAAACCCACATCTGATTCAATAAGTGAAGGGCCTGTGTTGTCTGTTCGCTACTCGCTAGATGCAAAGATTTTAGCAATTCAACGATCAAGTCATGAGATTCAATTTTGGAACAAGGAGACAGGCAGGACATTCAGTCATAGGTGTCGCCCAGAATCGGAGAGTATACTGGGATTTTTCTGGACAGACTGCCCTACGTGTAATTTTGTACTTGTGAAGACAAGTGGTCTAGACTTGTTCACTTATGATATGGAATCACAAAGTCTTCAGTTGGCTGAGTCCAAGCATACTAATGTGAGTTGGTACATTTACACACATGAAAGTCGTCTGGTTCTCCTTGCTTATGGGATGCAGTGCAAGAGTTTTACAGGGTTTCAGCTTTCGTCGATTGGCATCATTCGTTTGCCCAAATTTGATATGCTTATGGCCAAGTCTGAAGCCAATAATAAGCCAGTCCTTAATGCTGAAGATATTCATGTTATCACTGTCTATGGAAGAATATACTGCTTTCAAGTTGATAGAATAGCCATGCTGCTCCATTGCTATAGATTTTACCGTGATGCTGTTGTACAACAGGGATCTTTGCCAATTTATTCAAGCAAGGTAGCTGTGAGTGTGGTTGACAATGTGGTGCTTGTTCATCAAGTTGATGCCAAGGTTGTTCTACTGTATGACCTATATTCCGATTCCAGGGCACCAATATCTGCTCCACTTCCTCTACTTTTGAGGTGTTATCCTAGATCTAGCATTTCATCTTTTACACTCAGTGGCAAAGATGATGGAAGCACAGAGTTAAGACAAACAAATGATCAGGAAACAACTCTTTACAGAGATGGGTGGGCATTCCTCATTCCTGATCTTATATGTGATACCACTGGTGGCCTTCTCTGGAAGGTTCATTTGGACTTAGATGCTATATCTGCCAGTAGCTCGGAAGTACCCTCTGTACTGGAATTCCTGCAGCGACGAAAGTTAGAAGCCAATAAGGCTAAGCAGTTATGTTTGGCACTAGCACGGACCATCATCTTAGAGCGTAGGCCGTTGGGTATTGTTGCTCGGGCCATGGATGTCCTCATTACATCCTACTCACATGCAATTAAGACAGGCAGTTACTTCAAGGGTATGAAAGCTGAGAATACCCCTGCTTCCACTGGCCAACGTGTCCCTAGCACGACATTAGCTGCTGATGAATCATCTGACAGAGGAAATTTGAGGAGCGGATCCATTAGAATTGATTCTGCCTCTGCTGTTAGCAATGAACCTCGTGGTCGGTCTTTAACATTTTCAGATTCAGATTCTGAGGAAAAGATTGGTCCAAGTTCAGGCAAAGTGGTAATGGGTGGTGAAATTTCTGGTGACAAGGTTCAGCCATCATCATCCCAATTGCCCGGTCCTGGTGGTGTACCTTTGGATGTTAATAATGCAGAGCAGAATGAATCTCAGATCACAACTGCAGCCATTTCACCCAATGAGGTTTACCGCTATGTGTTTGCCCCAGTAGATGAAGAGATGGCTGGAGACCCTGCTTATTTGGTTGCTGTCATCGTTGAGTTCCTTCGCAGTGCTAATCTTGAGAGAATCAGGATGTATCCTAACTTATATGTTCTGATGGTGCAATTGTTGGCACGCAGCGAAAGATATGCAGAACTGAACTTGTTTCTCATCGATAAGATTATTGAACCCTCCAAAGAAGTTGCATATCAACTACTAGAATCCGGTCACCAGCATCTGCCGACCAGGAAGCTGGGTATTGACATGCTTAGGCAGTTATCTTTGCATCATGATTATGTATTGTCACTGGTCCAGGACGGATACCATCTAGAAGCTCTACGTTATGCCCGTAAGCATAAGGTTGTCAATGTGCGGCCATCATTGTTTCTTGAAGCTGCTTATGCCTCAAATGACTCTCAACGTCTAGCCACAGTGCTAAGATTCTTTTCAGACTTCATTCCAGGCTTCAAAAGCACGTCTGATCATGATACATACTGCCACATTCTAAGCCAGATGAACGCATCCATAGCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28328.p1 GENE.S_Transcript_28328~~S_Transcript_28328.p1 ORF type:complete len:744 (+),score=130.04,Mic1|PF07035.8|6e+03,Mic1|PF07035.8|2.6e-42 S_Transcript_28328:709-2940(+)
MHSEASSSQPSMGLSGSGALSHAYIQYPPLTCSIPGSKGFFYDDGNKLLLSPTSDQVFSWKVAPFDPHVKPTSDSISEGPVLSVRYSLDAKILAIQRSSHEIQFWNKETGRTFSHRCRPESESILGFFWTDCPTCNFVLVKTSGLDLFTYDMESQSLQLAESKHTNVSWYIYTHESRLVLLAYGMQCKSFTGFQLSSIGIIRLPKFDMLMAKSEANNKPVLNAEDIHVITVYGRIYCFQVDRIAMLLHCYRFYRDAVVQQGSLPIYSSKVAVSVVDNVVLVHQVDAKVVLLYDLYSDSRAPISAPLPLLLRCYPRSSISSFTLSGKDDGSTELRQTNDQETTLYRDGWAFLIPDLICDTTGGLLWKVHLDLDAISASSSEVPSVLEFLQRRKLEANKAKQLCLALARTIILERRPLGIVARAMDVLITSYSHAIKTGSYFKGMKAENTPASTGQRVPSTTLAADESSDRGNLRSGSIRIDSASAVSNEPRGRSLTFSDSDSEEKIGPSSGKVVMGGEISGDKVQPSSSQLPGPGGVPLDVNNAEQNESQITTAAISPNEVYRYVFAPVDEEMAGDPAYLVAVIVEFLRSANLERIRMYPNLYVLMVQLLARSERYAELNLFLIDKIIEPSKEVAYQLLESGHQHLPTRKLGIDMLRQLSLHHDYVLSLVQDGYHLEALRYARKHKVVNVRPSLFLEAAYASNDSQRLATVLRFFSDFIPGFKSTSDHDTYCHILSQMNASIAA*

Click here to download the sequence:
Link to NCBI Protein BLAST