Transcript Information: S_Transcript_283380.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6789030927342
Replicate 20.11256525284446
Replicate 30
Condition 2: 8 Hour
Replicate 10.10880301182211
Replicate 20.34242625468969
Replicate 30.21750864903042
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_283380.p1 GENE.S_Transcript_283380~~S_Transcript_283380.p1 ORF type:internal len:196 (+),score=-5.87,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|7.6e-09,zf-RING_11|PF17123.1|2.1e+03,zf-rbx1|PF12678.3|6.9e-08,zf-C3HC4_2|PF13923.2|2.7e-07,zf-C3HC4|PF00097.21|1.4e-05 S_Transcript_283380:3-587(+)
CACTTTCTTCACTCACTCCCACACCCACTTTCATTTATTAAAACTTTTTCTCATGATTTCATGTCAACAACACCAAGTCCAACTCCAACCCCACCAGCCTCACCCATCACCGCAGCCGCTGCTGCCACCACCGCCGTCGGCCTCGGCTACGGCATCGCCATCGCCATCGCCATCAGCATCCTCGTCCTCATTTCCACCATCATGCTCGCCTCCTACGTCTGCGTCCGCTCCATGTCCGGTGGCCACCGCACCGATGCGGACGCAACCAGCGACGACAACCACCACCACCGCCGCCATCCGGCCCAGCCCACTATAAGCGGGCTCCCGGGCCCAATGCTGGCGAAGGTGTGCTGGGACATGCAGCCCAAGAAGGGCCCCAAGTACCCGGAGCTAGTGTTGGGAGAAAGCAAGAGGCTGCCGAAGCCCAACAACGGCCCATGTTCAATATGCTTGTCAGAGTACCGGCCCAAAGATACTATAAGGTGTATGCCAGATTGTAATCATTGCTTTCATGTATCTTGTATTGATCAGTGGCTCCGGATGAGCCCCACGTGTCCCATCTGCCGGAGCTCGCCGGCACCGTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_283380.p1 GENE.S_Transcript_283380~~S_Transcript_283380.p1 ORF type:internal len:196 (+),score=-5.87,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|7.6e-09,zf-RING_11|PF17123.1|2.1e+03,zf-rbx1|PF12678.3|6.9e-08,zf-C3HC4_2|PF13923.2|2.7e-07,zf-C3HC4|PF00097.21|1.4e-05 S_Transcript_283380:3-587(+)
HFLHSLPHPLSFIKTFSHDFMSTTPSPTPTPPASPITAAAAATTAVGLGYGIAIAIAISILVLISTIMLASYVCVRSMSGGHRTDADATSDDNHHHRRHPAQPTISGLPGPMLAKVCWDMQPKKGPKYPELVLGESKRLPKPNNGPCSICLSEYRPKDTIRCMPDCNHCFHVSCIDQWLRMSPTCPICRSSPAPS

Click here to download the sequence:
Link to NCBI Protein BLAST