Transcript Information: S_Transcript_283392.p1


Annotated TAIR IDAT5G01970.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:373014-374651 | Reverse length=351
E-Value2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0006472445042
Replicate 27.7868669026523
Replicate 34.7010895899374
Condition 2: 8 Hour
Replicate 17.5266083472234
Replicate 27.0186191810907
Replicate 37.5232403311699
Condition 3: 24 Hour
Replicate 17.1388508139197
Replicate 25.9251794970843
Replicate 34.9454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_283392.p1 GENE.S_Transcript_283392~~S_Transcript_283392.p1 ORF type:5prime_partial len:153 (-),score=13.78 S_Transcript_283392:309-767(-)
TATGGTAACAGGTTCAAGTCACAACAGTTCAATGATCCAACAACAGGGAGCCAGTTCTATCAATCTCGTCAGTATTCTGAAGGAGGTCCAAAGATGGATAATGCCAAATTGCGGAAACGCCTGGATGCCATAACAACTTCTCTCAACAACCTCGGTGACACGATTGGAACTGCTTTCGAAGAGGGTCGTACTAAAACGGCTGATATTATCCAAGAAACTCGTAATAAGACAGCAGATATCCTTCAAGAGACTCGCAAACTCCAAATTAGGAGAAGAGGAGGCAGTACAGATAGTCAGGATCAGGCAACTGTGGTGCAGAACAGTTCATGGCAGCGACCTGTTATTCAGCCTGTGCAGACGAACGCACTAGCCAACCAAGAAACACAATTGAAGGCATCTCGCGACGTAAGGTGGCAAATATGTAATCGTGTCTCGATATTATTGTGGCAACTAATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_283392.p1 GENE.S_Transcript_283392~~S_Transcript_283392.p1 ORF type:5prime_partial len:153 (-),score=13.78 S_Transcript_283392:309-767(-)
YGNRFKSQQFNDPTTGSQFYQSRQYSEGGPKMDNAKLRKRLDAITTSLNNLGDTIGTAFEEGRTKTADIIQETRNKTADILQETRKLQIRRRGGSTDSQDQATVVQNSSWQRPVIQPVQTNALANQETQLKASRDVRWQICNRVSILLWQLI*

Click here to download the sequence:
Link to NCBI Protein BLAST