Transcript Information: S_Transcript_28388.p1


Annotated TAIR IDAT1G31410.1
Annotated Gene Nameputrescine-binding periplasmic protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11247094-11249345 | Reverse length=524
E-Value2.1E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5651379013166
Replicate 26.8269763913819
Replicate 36.2635707453738
Condition 2: 8 Hour
Replicate 18.1277902718129
Replicate 210.341703616477
Replicate 37.8426231754177
Condition 3: 24 Hour
Replicate 15.9764303889361
Replicate 25.5162862138657
Replicate 35.663062800394


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28388.p1 GENE.S_Transcript_28388~~S_Transcript_28388.p1 ORF type:3prime_partial len:530 (+),score=122.28,SBP_bac_6|PF13343.2|1e-29,SBP_bac_8|PF13416.2|6.5e-21,SBP_bac_11|PF13531.2|3.3e-06 S_Transcript_28388:346-1932(+)
ATGGCCATCACACCTCTTTGTTCTTTGCCTTACCCAGTTGCCCATTTCCCATATCATAACCATCTAGTTACTAACCCTTCTGGGCATAGACCATTTAATGTGTTTCCTCAACGTAATATCAGATTTTCCCAATTAAAAGCTCCAGAAAGTCAGCAACATTGTGTGCATTCTTTGGAATCGTCTTCATTTGACAACAACCAATGGTTCAAATTGCCTAAACCACTGATTGAGCTCTCAGCCTCTTCCTTGCTATTGATAACACTTGGCTTCTTCACTTTGTCATCTTATGCTAAGCCACCTGCTGCCCTTGCTGTTGTTGATTCTTCTGGATGTCGGCCCATGGTGGAGGAGAGAACTGAAGGAGAAGATAGTGTTTTAGGGTCAAGAGATGTTGAAAATATAGAAGATGAGAAGTTGCGTGAAGAATTTGAAAATTGGAAATCTAAAACCTATGCTTTGACTGTCCCTTTAAGAGTGGTTGCTTTACAAGGCTCTGTTCCACCTGCGTGGATCAAGGATTTTATCCAATCTCAAGGAAGAAGATCAAAGTTGAGTGTGCAATTCCGACTTACTCTTGAAGGCATATATTCTGAACTTTTGAGGTCATCTGTCAAAGTTGATGCCTCTTCAAAATCTGCTACTACAGCTGATCTCATATCTGTTGGTGATTCCTGGCTCGATCTTGCCATCGGCAATGCCATAATTGAGCCAATTGAAAATGCAGAAGGCCAAGATTGGTTTAAGGATTTGACAGAAAAATGGAAGGTTTATTTGCGTAGGAACAGTAAAGGGAAGATTGATCCTGATGGTAGGATATGGTCTGTCCCATATCGATGGGGAAGCTTGGTAATAGCTTACAAGAAAAGAAAATTCGACAAGCTTAATCTTGCTCCAGTAGAGGACTGGGCAGATTTATGGCGTCCTGAGCTTGCTGGAAGGATTGCAATGGTTGATTCTCCAAGAGAGGTTGTTGGAGCAGTATTGAAATACATGGGAGCCTCATACAATACCAATGATATTAAGAAAGAGGTTCCTGGTGGGATATGTGCTGTAAAGCAGAATCTGGCCCTGCTCGCAAAACAGGTGCTGTTATTTGACAGTACGACTTATCTGAAAGCTTTTAATGTTGGTAATGCTTGGGTGGCTGTTGGATGGAGTAGCGACATTCTTCCGGCAGCAAAACGCATTTCAGATGTTGCAGTTGTTGTTCCAAAGTCTGGAGCTAGTTTATGGGCAGATCTATGGGCTATCCCAGCCACAACTAGATGCCCACAAACAGATAAAGTCAGAGGGCGAATCAGAGGGCCTTCTCCGCTGATTCATCAGTGGATAGAATTCTGCCTGCAACCTGCTCGGGAGCTTCCCTTCAAGCTTGGGGTGTTTCCTGGTGCTTCCCCATATAACTTAGAAGGTGTCCCTCTCGAAGTCAATAAAGAACTTCCCAGGGGTGCGCCAAAGCTGATCACTAATCTGGTTGCTGGAATCCCTCCTCCCGAGATATTAGCTAAATGCGAATTTTTGGAGCCGCTGTCCGAGTCTGCAATGTCAGATTATAGATTGTTGATCTCTACTATGGAGAGACCTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28388.p1 GENE.S_Transcript_28388~~S_Transcript_28388.p1 ORF type:3prime_partial len:530 (+),score=122.28,SBP_bac_6|PF13343.2|1e-29,SBP_bac_8|PF13416.2|6.5e-21,SBP_bac_11|PF13531.2|3.3e-06 S_Transcript_28388:346-1932(+)
MAITPLCSLPYPVAHFPYHNHLVTNPSGHRPFNVFPQRNIRFSQLKAPESQQHCVHSLESSSFDNNQWFKLPKPLIELSASSLLLITLGFFTLSSYAKPPAALAVVDSSGCRPMVEERTEGEDSVLGSRDVENIEDEKLREEFENWKSKTYALTVPLRVVALQGSVPPAWIKDFIQSQGRRSKLSVQFRLTLEGIYSELLRSSVKVDASSKSATTADLISVGDSWLDLAIGNAIIEPIENAEGQDWFKDLTEKWKVYLRRNSKGKIDPDGRIWSVPYRWGSLVIAYKKRKFDKLNLAPVEDWADLWRPELAGRIAMVDSPREVVGAVLKYMGASYNTNDIKKEVPGGICAVKQNLALLAKQVLLFDSTTYLKAFNVGNAWVAVGWSSDILPAAKRISDVAVVVPKSGASLWADLWAIPATTRCPQTDKVRGRIRGPSPLIHQWIEFCLQPARELPFKLGVFPGASPYNLEGVPLEVNKELPRGAPKLITNLVAGIPPPEILAKCEFLEPLSESAMSDYRLLISTMERPD

Click here to download the sequence:
Link to NCBI Protein BLAST