Transcript Information: S_Transcript_284097.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27625952839288
Replicate 20.61073465903155
Replicate 30.82960404528307
Condition 2: 8 Hour
Replicate 10.73790277913955
Replicate 21.5482248193582
Replicate 31.0326016140821
Condition 3: 24 Hour
Replicate 10.982641817916
Replicate 20.94105792012515
Replicate 30.43636755026152


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_284097.p1 GENE.S_Transcript_284097~~S_Transcript_284097.p1 ORF type:5prime_partial len:289 (-),score=59.72,gag_pre-integrs|PF13976.2|3.9e-09 S_Transcript_284097:32-898(-)
ATTGAGGAGGCTAATCGCCTCAAAGATAAGAACTCTGTCCCTTCTAATGAATTGTATGTTAAAGCTAACATTGTGGAATCTTCTGGTGGTTCCAAAAATGACAGGTCTAAGGATCCTGACAGACCCGGAAAGGGCAAGCAGTCCAACTACAACAAGGGGAAGTTCAAGAACCATGGCAAGATCCAGAAGAAGAAAGGATCGAACACCGTGATGTGCTACACCTGCGGGAAGCCTGGCCACAAATCCTACCAATGTGATCAGCGGGCTGACAAGAAGGCAAAGGAGCAGTCCAATGTAGCCGAGGCTCCAAAAGAGACTACAAAGGTGTTCGCTGCTGTGGCAACCATGTGTAACGTGGTTGAGGATCCGAAGAGGTGGATCGTGGACTGTGGAGCTACAAAGCATTTTTGCTCCAACCGGGACCTGTTTGCTGATTTTGAAGCTGCCTCGGGACACGAGAAGGTGTACATGGGCAACAAATCAGAATCAGAGATTCTTGGAAAAGGGACGGTAAACCTGAAACTGTCTTCTGGTAACATTCTTAAATTACAGAATGTGTTGTATGTCCCTGCTATGAGTAAAAATTTAATTTCCAGTCTAGCTTTAGATAGGGCTGGAATTGAGACTCGTATTAAGAATCAGAAGGTTATTCTGATTCGCAATGATGAATTTGTAGGGAAAGGTTATGTTCAGGGTGATCTGTACACCCTGGAGGCTGAGGCCATAACTGTTTTTGGTGCTAATAAAATTTCTACTTCCGCTTATATTGTTGAGTCTGTTGATATTTGGCATGCAAGATTAGGACATGTGAATTATGGTTCATTGAAACGTTTGAGAAAAATGAACTTGCTTCCTAATCTGACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_284097.p1 GENE.S_Transcript_284097~~S_Transcript_284097.p1 ORF type:5prime_partial len:289 (-),score=59.72,gag_pre-integrs|PF13976.2|3.9e-09 S_Transcript_284097:32-898(-)
IEEANRLKDKNSVPSNELYVKANIVESSGGSKNDRSKDPDRPGKGKQSNYNKGKFKNHGKIQKKKGSNTVMCYTCGKPGHKSYQCDQRADKKAKEQSNVAEAPKETTKVFAAVATMCNVVEDPKRWIVDCGATKHFCSNRDLFADFEAASGHEKVYMGNKSESEILGKGTVNLKLSSGNILKLQNVLYVPAMSKNLISSLALDRAGIETRIKNQKVILIRNDEFVGKGYVQGDLYTLEAEAITVFGANKISTSAYIVESVDIWHARLGHVNYGSLKRLRKMNLLPNLT*

Click here to download the sequence:
Link to NCBI Protein BLAST