Transcript Information: S_Transcript_284696.p1


Annotated TAIR IDAT5G66520.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26551879-26553741 | Forward length=620
E-Value1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.18803513827427
Replicate 30
Condition 2: 8 Hour
Replicate 10.36350097131477
Replicate 20.57200749362937
Replicate 31.0900149343456
Condition 3: 24 Hour
Replicate 10.062059328098279
Replicate 20.12877165668379
Replicate 30.14330707048361


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_284696.p1 GENE.S_Transcript_284696~~S_Transcript_284696.p1 ORF type:3prime_partial len:352 (+),score=49.39,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|0.052,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|0.00086,PPR_2|PF13041.2|0.00017,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|0.25,PPR|PF01535.16|0.0025,PPR|PF01535.16|7.6,PPR|PF01535.16|4.7e+03,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|8,PPR|PF01535.16|5,PPR|PF01535.16|2.5e-09,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.0002,PPR|PF01535.16|6.1e-09,PPR_1|PF12854.3|9.7e+03,PPR_1|PF12854.3|28,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|47,PPR_1|PF12854.3|2,PPR_1|PF12854.3|5e-05,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|0.0022,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|12,PPR_3|PF13812.2|84,PPR_3|PF13812.2|25,PPR_3|PF13812.2|8.4e-05,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.015 S_Transcript_284696:77-1129(+)
ATGTCAGTTACTGAAGCAATTCCCGCCATTACAACCAACTCAAGAGCCCATCTACACATTTTCTCTCTCTTACAATCCTGCAACTCCATAAAGAAACTAACCCAAGTCCATACCCAAATCCTTGTCAATGGCTTTTCAAAAAAGAGAAACATTCTTATCAGCCTAATATCTCTGTACACAATCTATGGCAAGTTCCCACATGCTTGTAAGCTGTTCGATAAAATGCCTAGCCCAACTACGAATGCTTGGAACCAAATGATTAGAGGGTATGGTCATAGTGAAACCCCACACAAATCAATGGCATTGTTCACTAAAATGATGGATGAAGGTTTAGAGCCCAATGAGTACACTTACTCTTATCTCATAAGCGCTTGTGCGCGGTCTTTGATTTTGAGAGACGGGGAACAGGTTCATGGGAGAGTTTTGGCAAGTGGGTATTGCTCGAATGTGTTTATTTCAACAAGTTTGGTGAATTTTTATTACTCCAAGGGTGATAGTGTTGGTCTTGTGAATGCCTACAAGGTGTTTGATGAAATGCTTGAGAGAAATGTGGAGACTTGGAATTCTTTGCTTAAAGGACATATCAGGTGTGGTGGGGATGTTGGTGGGGCACTTCGGATATTTGATGAGACACCTGGGAAGAGCGTTGTGTCGTGGACTACAATGCTTACGGGTTATGCTCGAAATGGATGGTTTCGACAGGCGTTAATGTTGTTTCGAGAGATGAGGAGTGCCGGTGTGAAACTGGATCAGGTGGCACTTGTGGCAGCTTTGTCAGCTTGTGCTGAGTTAGGTGACCTGTGCTTAGGTAAATGGATTCATTCATATGTTAACAAGAGATTTCAGGGGAGGAATGAAGAAATCGATTTGCGTTTACAAAATGCCCTTATTCATATGTATGCTGGCTGTGGATTAATTGAAGAAGCATATAGGGTCTTTAGTGAAATGCCAAGCAGAACCATAGTTTCTTGGACAAGTATGATCATAGGATATGCTAAGCACGGGCTTGCAGAAAAGGCTTTGGATGTTTTTAAAATGATGGAAAACTTGGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_284696.p1 GENE.S_Transcript_284696~~S_Transcript_284696.p1 ORF type:3prime_partial len:352 (+),score=49.39,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|0.052,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|0.00086,PPR_2|PF13041.2|0.00017,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|0.25,PPR|PF01535.16|0.0025,PPR|PF01535.16|7.6,PPR|PF01535.16|4.7e+03,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|8,PPR|PF01535.16|5,PPR|PF01535.16|2.5e-09,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.0002,PPR|PF01535.16|6.1e-09,PPR_1|PF12854.3|9.7e+03,PPR_1|PF12854.3|28,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|47,PPR_1|PF12854.3|2,PPR_1|PF12854.3|5e-05,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|0.0022,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|12,PPR_3|PF13812.2|84,PPR_3|PF13812.2|25,PPR_3|PF13812.2|8.4e-05,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.015 S_Transcript_284696:77-1129(+)
MSVTEAIPAITTNSRAHLHIFSLLQSCNSIKKLTQVHTQILVNGFSKKRNILISLISLYTIYGKFPHACKLFDKMPSPTTNAWNQMIRGYGHSETPHKSMALFTKMMDEGLEPNEYTYSYLISACARSLILRDGEQVHGRVLASGYCSNVFISTSLVNFYYSKGDSVGLVNAYKVFDEMLERNVETWNSLLKGHIRCGGDVGGALRIFDETPGKSVVSWTTMLTGYARNGWFRQALMLFREMRSAGVKLDQVALVAALSACAELGDLCLGKWIHSYVNKRFQGRNEEIDLRLQNALIHMYAGCGLIEEAYRVFSEMPSRTIVSWTSMIIGYAKHGLAEKALDVFKMMENLG

Click here to download the sequence:
Link to NCBI Protein BLAST