Transcript Information: S_Transcript_28478.p1


Annotated TAIR IDAT5G48150.1
Annotated Gene NameGRAS family transcription factor
Annotated Gene Symbol(s)PAT1
Annotation TypeOrtholog
Chromosome Positionchr5:19522497-19524053 | Reverse length=490
E-Value1.1E-233
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.356197187554
Replicate 211.256525284446
Replicate 38.3146286981724
Condition 2: 8 Hour
Replicate 116.30066940753
Replicate 216.394954012416
Replicate 316.88658057018
Condition 3: 24 Hour
Replicate 17.9841225373786
Replicate 210.385828310497
Replicate 311.090212474977


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28478.p1 GENE.S_Transcript_28478~~S_Transcript_28478.p1 ORF type:complete len:539 (+),score=74.17,GRAS|PF03514.10|2.3e-135 S_Transcript_28478:324-1940(+)
ATGTCGAATGGTTTGTATTTTGAGCCTAACAGAGAAATTGAGGCGTATTTTATGCCTCAATGTCAAACACTAAACCCTCAGCCTTGCTATACCGACCTCAGCCATGAAAGCTACATGTCCTCAAAAGTTTTCCCAGGACAGTACTGCACCCTAGAATCGTCCTCGGGGATTGGGAGCTATCCAGTACACTGCACCACATCAACTCTCAGCTTCTCATCCAACACAAGTCCTGGATCGCAGCTCGATTCCAATTCATACCCGCCCGATCAACATTGCTCCCCCGATAATGCCACAAATTCACCTGTGAGTAACTCTTGTGTCACGGATGATCAATCTGACCTGAAGTACAAGCTGAGAGAGTTGGAAACTGTGATGCTCGGACCTGATGTTGATGTGATAGACGGCTATGGCAATGCATTTGAGAGCGGATTCGACTTACCCTCACTGGAGATGGACAGCTGGGGAAAAGTGATGGAGATGATTGCTCGTAAGGACTTGAAACAGGTCCTTCTTGCCTGTGCACAAGCAGTAGCCGAAAATGATCAATTAGTAGCCCAGTGGTTGATGGATGAATTGCGGCAATTGGTGTCAGTTTCAGGGGAGCCAGTTCAAAGATTGGGCGCATACATGTTAGAAGGGCTTGTAGCAAGGCAGGCTTCCTCAGGTAGCTCCATTTACAAAGCCTTAAAGAGCAAAGAGCCTGCTAGTGCTGATCTTTTATCTTTTATGCACATCCTTTTCGAGGTTTGTCCATACATTAAGTTTGGCTACATGTCTGCAAATGGTGCAATTGCTGAAGCAATGAAGGACGAAAAAAGAGTCCACATTATCGATTTCCAAATTGGGCAGGGAAGTCAGTGGGTTACCCTAATCCAAGCATTTGCAGCCCGTCCTGGTGGGCCACCCCACATCCGAATAACTGGGATTGACAACTCCTATTCTGCATACGCCCGTGGAGGAGGGCTAAATATTGTTGGTCAAAGGCTTTCGAGGTTGGCTTGGTCATTCAAGGTTCCATTTGAGTTTCATGCTGTTGACAGGTCTGGTTGTCAAGTGCAGCTCAAAGATCTTGGTGTTCAACGCGGTGAGGCACTGGCTGTGAATTTTGCTTTCATCCTGCATCACATGCCAGATGAAAGTGTGAGCACCGAGAATCACAGGGATCGACTATTGAGGCTTGTTAAGGGCCTGACCCCGAAAGTGGTGACCCTAGTGGAGCAAGAGTGTAACACAAATACCGCTGCTTTCTTGCCTCGGTTTCTCGAGACATTGGATTATTATACAGCAATGTTTGAGTCGATGGATGTGACTTTGCCAAGGGATCATAAAGATCGGATCAACGTTGAGCAACACTGTTTAGCAAGGGATGTTGTTAACTTGATAGCTTGTGAGGGATCCGAGAGGGTGGAGCGCCATGAGCTCCTTGGAAAGTGGAGGTCGCGCTTCACAATGGCAGGATTTAAGCCATACCCTTTGAGCACTTTGGTGAATAACACAATAAAGACACTACTAAAGAACTACTGCGATCGGTATAGACTAGAGGAGAGGGATGGGGCTCTATATCTTGGTTGGATGAATAGAGATTTGGTTGCTTCTTGTGCCTGGCAATGTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28478.p1 GENE.S_Transcript_28478~~S_Transcript_28478.p1 ORF type:complete len:539 (+),score=74.17,GRAS|PF03514.10|2.3e-135 S_Transcript_28478:324-1940(+)
MSNGLYFEPNREIEAYFMPQCQTLNPQPCYTDLSHESYMSSKVFPGQYCTLESSSGIGSYPVHCTTSTLSFSSNTSPGSQLDSNSYPPDQHCSPDNATNSPVSNSCVTDDQSDLKYKLRELETVMLGPDVDVIDGYGNAFESGFDLPSLEMDSWGKVMEMIARKDLKQVLLACAQAVAENDQLVAQWLMDELRQLVSVSGEPVQRLGAYMLEGLVARQASSGSSIYKALKSKEPASADLLSFMHILFEVCPYIKFGYMSANGAIAEAMKDEKRVHIIDFQIGQGSQWVTLIQAFAARPGGPPHIRITGIDNSYSAYARGGGLNIVGQRLSRLAWSFKVPFEFHAVDRSGCQVQLKDLGVQRGEALAVNFAFILHHMPDESVSTENHRDRLLRLVKGLTPKVVTLVEQECNTNTAAFLPRFLETLDYYTAMFESMDVTLPRDHKDRINVEQHCLARDVVNLIACEGSERVERHELLGKWRSRFTMAGFKPYPLSTLVNNTIKTLLKNYCDRYRLEERDGALYLGWMNRDLVASCAWQCS*

Click here to download the sequence:
Link to NCBI Protein BLAST