Transcript Information: S_Transcript_284784.p1


Annotated TAIR IDAT4G02750.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:1221116-1223461 | Reverse length=781
E-Value2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50003551381341
Replicate 21.013322276128
Replicate 30.92406193320754
Condition 2: 8 Hour
Replicate 11.4691813788421
Replicate 21.0742223772729
Replicate 30.97901596515572
Condition 3: 24 Hour
Replicate 10.77528814058476
Replicate 20.70972270072069
Replicate 30.73717875088022


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_284784.p1 GENE.S_Transcript_284784~~S_Transcript_284784.p1 ORF type:complete len:479 (+),score=42.12,PPR|PF01535.16|0.39,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|0.00088,PPR|PF01535.16|0.0091,PPR|PF01535.16|9.5e-05,PPR|PF01535.16|0.00016,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|1.4,PPR|PF01535.16|62,PPR|PF01535.16|0.0064,PPR|PF01535.16|0.0081,PPR|PF01535.16|7.5,PPR|PF01535.16|2.3e+03,PPR_2|PF13041.2|8.7,PPR_2|PF13041.2|2.9e-07,PPR_2|PF13041.2|0.00059,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|0.00028,PPR_2|PF13041.2|0.06,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|0.45,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|4.4e-09,PPR_1|PF12854.3|28,PPR_1|PF12854.3|9.7e-08,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|0.00055,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|62,PPR_1|PF12854.3|20,PPR_1|PF12854.3|88,PPR_1|PF12854.3|0.075,PPR_1|PF12854.3|8,PPR_1|PF12854.3|47,PPR_1|PF12854.3|2.9e+03,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.00083,PPR_3|PF13812.2|40,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|8.7e+03,PPR_3|PF13812.2|6.2e+03,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|0.065,PPR_3|PF13812.2|77,TPR_19|PF14559.2|6.4e+03,TPR_19|PF14559.2|1.7e+02,TPR_19|PF14559.2|0.22,TPR_19|PF14559.2|2.2e+02,TPR_19|PF14559.2|2e+03,TPR_19|PF14559.2|3.3e+03,TPR_19|PF14559.2|3.4e+02 S_Transcript_284784:156-1592(+)
ATGTCTTACTTCAAGAACCGCGACACTGTCTCTGCACGCCAAATGTTCGACGAAATGCCGCAGAGAAATGTGGTGACTTGGAATTGTATGATTTCCGGGTTTGCTAGGAATCACATGATTCATCAAGCTCGTCAAATGTTTGATGCTATGCCCACCAAAAATGTCGTTTCTTGGACTGCCATGTTAAGTGGGTACATTGGGTGTGGTAACTTGGGAGAAGCGCGGAATTTGTTTGATCAAATACCCCATGAAATGAGAACCCATGTTTGTTGTGATATTATGTTGAGTGGGTACATAAAATTTGGAATGATGGTTGAAGCTAGAGAGTTGTTTCGAAATGTTGGTCTTTTTAATAGGATGTTGAGTGGTTATGTACAAATGGGATATGTTAATGAAGCAGAACAGCTGTTCTTGAGCATGCCTGAGCATGATGTGACATCATGGACTAATATGATAACTTGCTATGCAAGAGCTGGTTTAATGAACAAAGCAAAGGCCATATTTGACAATATTCCGATCGATCAAAAGGATGCAATGGCTTGGACTCTAATGATCAGGGGTTATATGCAAAATGGCATTGTAAATGAGGCTTTGAAATTATTCAATGTGATGCCAATTCGGGATATTGTCGCTTGGAATTGCGTTATAGGTGGGTTTGTTCAGAATGGTAGATTAAGGGAGGCCTTAGACATGTACAAAAGAATGCCAAGGAGGAACATTGTTTCATCAAATTCGATACTTTATGGGTTTGTGAGAGAGGGAGATATGGTCAGTGCCCGAAACTTCTTTGAAAATGTTATGACCCGTAAAGATATAACGTCATGGAATACACTGATTTGTGGGTATCAAACAGAGGAAACTTTGTTCTTATTTTCCCAGATGTTAAAACATGAATTTAAGCCTGACCAAACAACTTACTCAACAATTTCATCTGTCTGTGGTTCGCTTGCGCTGCGTGGTTGGGGCAAAGCCATCCATCTACGAACAATCAAGACAGGTTACAATTATGTCATGATGGTTTCAAGTTCGCTTATATCAATGTATTTTAAATGTGGATTGATAGATGATGCTGAAACTTTGTTTGAGTGCACGAAAAAGCGGGATACTATAACTTGGAACACTATCATAGTTGCACAAGCCTATCATGGATCTGCAGGTAAGGCTCTAGAGCTTTACTCTTCCATGATTGAAGCTGGATATGAACCAAATCATATTACATTTCTAGCCCTATTAACAGGTTGTGCTCACTGGGGTCTCGTTGAAGAGGTCAGAAATATTTCAAGTCTATGCAAAAGGACTGGAGTATTACTCCACAGCCTGAGCATTATGCTTGTATGGCTGATTTGTTTGGAAGATCTGGTATGTTATTTGAGGCTTATGAGTTCATTAAACAATTGCCTGCGGATATTCCGTCTTATGCTTGGGAAACCTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_284784.p1 GENE.S_Transcript_284784~~S_Transcript_284784.p1 ORF type:complete len:479 (+),score=42.12,PPR|PF01535.16|0.39,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|0.00088,PPR|PF01535.16|0.0091,PPR|PF01535.16|9.5e-05,PPR|PF01535.16|0.00016,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|1.4,PPR|PF01535.16|62,PPR|PF01535.16|0.0064,PPR|PF01535.16|0.0081,PPR|PF01535.16|7.5,PPR|PF01535.16|2.3e+03,PPR_2|PF13041.2|8.7,PPR_2|PF13041.2|2.9e-07,PPR_2|PF13041.2|0.00059,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|0.00028,PPR_2|PF13041.2|0.06,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|0.45,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|4.4e-09,PPR_1|PF12854.3|28,PPR_1|PF12854.3|9.7e-08,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|0.00055,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|62,PPR_1|PF12854.3|20,PPR_1|PF12854.3|88,PPR_1|PF12854.3|0.075,PPR_1|PF12854.3|8,PPR_1|PF12854.3|47,PPR_1|PF12854.3|2.9e+03,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.00083,PPR_3|PF13812.2|40,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|8.7e+03,PPR_3|PF13812.2|6.2e+03,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|0.065,PPR_3|PF13812.2|77,TPR_19|PF14559.2|6.4e+03,TPR_19|PF14559.2|1.7e+02,TPR_19|PF14559.2|0.22,TPR_19|PF14559.2|2.2e+02,TPR_19|PF14559.2|2e+03,TPR_19|PF14559.2|3.3e+03,TPR_19|PF14559.2|3.4e+02 S_Transcript_284784:156-1592(+)
MSYFKNRDTVSARQMFDEMPQRNVVTWNCMISGFARNHMIHQARQMFDAMPTKNVVSWTAMLSGYIGCGNLGEARNLFDQIPHEMRTHVCCDIMLSGYIKFGMMVEARELFRNVGLFNRMLSGYVQMGYVNEAEQLFLSMPEHDVTSWTNMITCYARAGLMNKAKAIFDNIPIDQKDAMAWTLMIRGYMQNGIVNEALKLFNVMPIRDIVAWNCVIGGFVQNGRLREALDMYKRMPRRNIVSSNSILYGFVREGDMVSARNFFENVMTRKDITSWNTLICGYQTEETLFLFSQMLKHEFKPDQTTYSTISSVCGSLALRGWGKAIHLRTIKTGYNYVMMVSSSLISMYFKCGLIDDAETLFECTKKRDTITWNTIIVAQAYHGSAGKALELYSSMIEAGYEPNHITFLALLTGCAHWGLVEEVRNISSLCKRTGVLLHSLSIMLVWLICLEDLVCYLRLMSSLNNCLRIFRLMLGKPC*

Click here to download the sequence:
Link to NCBI Protein BLAST