Transcript Information: S_Transcript_2852.p1


Annotated TAIR IDAT5G17520.1
Annotated Gene Nameroot cap 1 (RCP1)
Annotated Gene Symbol(s)RCP1, MEX1
Annotation TypeOrtholog
Chromosome Positionchr5:5772796-5775231 | Reverse length=415
E-Value8.3E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.763690819399
Replicate 240.517178953754
Replicate 341.927061236784
Condition 2: 8 Hour
Replicate 1101.69420943287
Replicate 2102.55506315688
Replicate 399.058927304458
Condition 3: 24 Hour
Replicate 150.375934591627
Replicate 244.533330690907
Replicate 352.388779149879


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2852.p1 GENE.S_Transcript_2852~~S_Transcript_2852.p1 ORF type:complete len:428 (+),score=76.33 S_Transcript_2852:459-1742(+)
ATGGTAGCAGCAGTAGCAGCACCAGCAGTGTCACAGTCTTTACTGCGGCCCTCCCGGTTTTCTCCATCTATTCCTTCTCCTCAAGCTTCTTCAAGGTTACAGCCTTCAACGTCGGTTTCCTCCACCCGTCTGTTGAAGAACCGGAAGGGCTATTGCTTAGGTGGCAGTAACAATGGCTCTATATATCGTTTGATTGGTAACGGCCACTGCAGTAGCCTGCCCTCACTTCTCCATCAGCGCTTAAAGCCGCTTGCTGCCCTTGATTCTGATGTTCCCCAGCCTATTCAGCCGGGAGACGAAACAGCTACATTGAAAAATGACGATGATGTGTATAAGCAATGGGACCAGTGGACAGCAAAGTTTGCTGCAGGTGCCAATATTCCCTTTCTCCTCCTTCAGATGCCCCAAATATTGCTCAATGCTCGTAATCTAATGGCGGGGAATAAATCTGCACTTTTGGCTGTCAGTTGGCTGAGCATCCTCACTGGTTTGCTTGGGAACCTTTCGCTGCTCTCGTACTTTGCCAAGAAGAAGGAGACCGAAGCAATGATTGTGCAATGCCTGGGAGTGATTTCTTCATACACAGTGATCACACAGCTAGCAATGGCTGAGGCCATGCCTGCCTCTTACTTCCTTTTAACCTCTGCAGTGGTGGCCACTGGTGTTATTTCCAATTTACTCAATTATTTTGGCATGCTTCTTCCTGCTATCTGGCGTTTCTGGGAAGATTTCATCACCATTGGTGGACTTTCTATCCTTCCTCAGGTGATGTGGTCAACATTTGTTCCATATATTCCAAGCAGTCTGCTTCCTGGGGCAATAGCTTTTGTTGCAGCCATTATAGCAGTTGTCATGGCTAGAACGGGTAAACTCTCTGAAGGAGGTGTCAGATTTGTTGGAGCAATATCAGGGTGGACTGCTACACTTCTCTTCATGTGGATGCCAATTGCACAAATGTGGACAAACTTCCTGAATCCTGATAACATCAATGGCTTATCAGCTATCTCCATGTTGCTTGCAATGATTGGAAATGGACTAATGATCCCACGTTCACTTTTCATCCGTGATTTGATGTGGTTCACTGGTTCAATGTGGGCGACTTTGATGTATGGCTGGGGGAATCTCATATGCCTGTATTTGTTTAAAAGCATCAGTCAGGAATTTTTCTTGGCATCCACAGCTGGTTTATTTTTCTGGATAGGGCTTACATTTTGGAAGGACAGCCGGGCCTATGGGCATGGATCACCTATGAGATCTTTGAAGGAGCTGGTATTTGGGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2852.p1 GENE.S_Transcript_2852~~S_Transcript_2852.p1 ORF type:complete len:428 (+),score=76.33 S_Transcript_2852:459-1742(+)
MVAAVAAPAVSQSLLRPSRFSPSIPSPQASSRLQPSTSVSSTRLLKNRKGYCLGGSNNGSIYRLIGNGHCSSLPSLLHQRLKPLAALDSDVPQPIQPGDETATLKNDDDVYKQWDQWTAKFAAGANIPFLLLQMPQILLNARNLMAGNKSALLAVSWLSILTGLLGNLSLLSYFAKKKETEAMIVQCLGVISSYTVITQLAMAEAMPASYFLLTSAVVATGVISNLLNYFGMLLPAIWRFWEDFITIGGLSILPQVMWSTFVPYIPSSLLPGAIAFVAAIIAVVMARTGKLSEGGVRFVGAISGWTATLLFMWMPIAQMWTNFLNPDNINGLSAISMLLAMIGNGLMIPRSLFIRDLMWFTGSMWATLMYGWGNLICLYLFKSISQEFFLASTAGLFFWIGLTFWKDSRAYGHGSPMRSLKELVFGS*

Click here to download the sequence:
Link to NCBI Protein BLAST