Transcript Information: S_Transcript_285378.p1


Annotated TAIR IDAT1G52530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19569045-19570004 | Forward length=319
E-Value5.8E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97256815145178
Replicate 20.7329830417779
Replicate 30.7965301298565
Condition 2: 8 Hour
Replicate 10.77933320095835
Replicate 21.8581269634324
Replicate 31.9120527751977
Condition 3: 24 Hour
Replicate 10.21772309126838
Replicate 20.67765549563829
Replicate 30.586559172212


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_285378.p1 GENE.S_Transcript_285378~~S_Transcript_285378.p1 ORF type:complete len:301 (+),score=57.27,Hus1|PF04005.8|3.3e-55 S_Transcript_285378:140-1042(+)
ATGAAGTTCAAGGCATTCCTGACAGAAAATGGGGTAACCCTCTTAGAGAAAAGATTCATCCCAGCCCTTGAAAAAATGGGCAAAATCTGCCATGTCTATCTAACCAAGGACCATGCTTTTTTTCTCCACAACATCCTCACAAATGATGGTGTTCAATCCATAACCCAGTTCAAAAAAGAATCCCTATTCTCAGATTACAGAATCTCAAGCCAAAACGAAGACCGAATCGCCTTTTCGCTTGATCTTTCCCTCCTTCTAAGAGCCCTAAAATCAGCTTCAGCTATATCTACATCACTTGATCATAATCACCAAATCAAGCTTGTGAAAAAACTACCCCCAAATACCACAAACCCAATGCCCTTTTTAACCTTTGAAACAAAAGGGTATGCTTCTGCTGTAATTCAAGACATACCCATCTCAAATCCCTTGTCAAGAATCCAAATTGTGGAGCTCCAAACCTCGCTCGACATTGCCCAAGACTTGCCTAGGACATTAGTGGGTTTAGGGGAGTTTGATAGGTTGTTGAATGTTGTTGAGAGGATGAAACATCTGGGGGATGTTATGGAGGTTGAGATCAATAAAATTGGTGAATTGGGTTTGAAGGTTTCTAGTAGTTTGGTCACTTCTGGGGCTGAGTTTAAGAGGCTGATGATTGTAGGAGAGAAAAGTAATAGTAGTAGTAGTAGTGAAGGGGATAGTTTAACAAGTGTGCTGGTTAGTATGAAGCACTTTGTTAAGTGTTTGCAGTGTCATTTGGCAAAGCCTGATTGTGCTTTCTATGGAGTTGGGTCTCAAGCTGGATCTTTAACTGTGGTTTTTCAGTTCTTTGTTCCGGGTTCGAGGCAAATTGATAAGTCTGTTAGCTTTCATTGTAGGCTTCCTCTTATTGATCCTGGTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_285378.p1 GENE.S_Transcript_285378~~S_Transcript_285378.p1 ORF type:complete len:301 (+),score=57.27,Hus1|PF04005.8|3.3e-55 S_Transcript_285378:140-1042(+)
MKFKAFLTENGVTLLEKRFIPALEKMGKICHVYLTKDHAFFLHNILTNDGVQSITQFKKESLFSDYRISSQNEDRIAFSLDLSLLLRALKSASAISTSLDHNHQIKLVKKLPPNTTNPMPFLTFETKGYASAVIQDIPISNPLSRIQIVELQTSLDIAQDLPRTLVGLGEFDRLLNVVERMKHLGDVMEVEINKIGELGLKVSSSLVTSGAEFKRLMIVGEKSNSSSSSEGDSLTSVLVSMKHFVKCLQCHLAKPDCAFYGVGSQAGSLTVVFQFFVPGSRQIDKSVSFHCRLPLIDPGS*

Click here to download the sequence:
Link to NCBI Protein BLAST