Transcript Information: S_Transcript_285520.p1


Annotated TAIR IDAT2G43990.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 1419 Blast hits to 494 proteins in 144 species: Archae - 0; Bacteria - 300; Metazoa - 246; Fungi - 102; Plants - 31; Viruses - 2; Other Eukaryotes - 738 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18211974-18213872 | Forward length=632
E-Value1.2E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57355606110303
Replicate 20.443791743973
Replicate 30.31797820833794
Condition 2: 8 Hour
Replicate 11.4400766449788
Replicate 20.54643883171746
Replicate 30.82690788122772
Condition 3: 24 Hour
Replicate 10.12554530741721
Replicate 20.74894779634481
Replicate 30.76100996049919


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_285520.p1 GENE.S_Transcript_285520~~S_Transcript_285520.p1 ORF type:5prime_partial len:696 (+),score=154.23 S_Transcript_285520:2-2089(+)
TTCTTCACACATTCCTATTTCTATTTTAGCAGATCTCCCATTTTCCTCCTTTATTACCACTACACAAATTCCCACTCAACTGACCCAAATGTGATAGTCATGATGATGAAGAAGAACACCATTAAACCCTCAACTTTAAAGCTTGCTAACAACAATAATGGAAGTACTACAAGAGAAAAAAGGGAGCAAAAAAAGAGCAGCCCTAGAAGCCCATTGAAGGTGAAAGATCTCAATGTTTCATCTTCATCTTCATGTTCTTCTTGTTCTACTGCAACTACTGCTTCTTCTTCCATTGAAGGTCCAAGAGGTTGTCTCAGGTTCTTTCTCTCTAACCATCATCACTCTTCTTATAAAAATGCTTGTAAAAAGCCTAAATCTTTTGTGCCTAAGACCCCTAAATCAGCCCCTATTGCTAAGAATTTGATGAAAAGAGGCAATAATTTGGAAAACCCAGAAAAACCCACCTCTAGAAAAGGTCAAAAGTTGAGAAAAAACCCTCCTTTGGGTTCAAAATTCAATCTTTCTGGGAAATTATCATCTGGGTCTGAGCTTAAAGTGTTTGATAATGCTGTGTTTACTCCTGTGAATAAAATGGGAAGTGGGTTTAGTGAGGATGGTTTTGCTAGCCATGATAAAGGTTTCAAATTGGGAGAAAAGGACACAAATGGTGGTTCTGATACTTGTAGCCCTACAATTTGTAGCCCTACAATTCCACCTGTTCAGGCTTCAGTGTCACCTGAGATACAAGGCGGTTCGACATCGGTTTTGCCAGCTACACCCACCACTTGTTATGGTGCTGGTTATGTCCTTTCTGGGGTTAGTGATAAGAGGAAATGTAAGCCTAGAGGAATACTTACTATTGGGGATAATGACTTGTTTGGGTCTAGTAAAGCTAAGGTGTTTGATGATAGGGATGAAGATAAGAGTGTTACTAGGGCTTCTCTAGTTATGTCTCCCACTGAGGCTTCAATGCACTGGCTTTTATCTCCTTGTGATGAGAAGCCAAGCCAGGGCCGAGAAGATGGTGGTGATGATGATGGGAGTGGGGTGAGACTTGGCCAATGTGAGGGTTTAGTGCCTTTTAAATCAGTTGGTTGCTCATCCTCACCTGTTTCTAGTCTTGGGTTTTCGTCCCAGATGTTCAACAACAGTAGTAGTACAATCGCTACTAGTGATGCTACCACTGCTACTACTCATTCTAGCAGGAAAAGCAGGAGTTCTTTCCTGAATGGAGACTCGACCTCTGAGTTTCGAGGCCTTCTGGGGCCTTCGTTCGATCATTTGATTCGTACTCCCTCACCATCTTCTCCTGTTTGCACACCAAGTTGCAAGGCGGATGTCTCACCTGGACAAGGCAAGTATCGGTATGATCATGCAGTGGAAGCTACTCCATACTTGGAGAATTCTACAGGAAGTGGGAATGTAATTCAGACCCCGCAATCAAATTCAAGTTCGCCCAAGTTTGGCTTGTCGAATTTGAGTAGATATGAGATTTCTAGACTTTGGTTTGAATGTGAACTTGATTCTGTGACTGAAGTTCTTCGGAGAGTGAGTTTGTCTCCTGAGCACCAGACACCAATGGATGATTCTCCCAAGACAAGTTTTGAGTTTAATCCCCTAATCAAACCTGCTAGTTCCATTGACTTCACCCTTTTTCGAAATGCTATAGATAGTCAAAGTCCTCCTGGGATTCCTGAATCATTGTTGCACAGTTTACCTGAGTCCGAGGTTAGGATATCATGGAGGGAAGGATTAGCGAGCCGCATGTTTGAAATGGACGAGCTGGACTGCTGTAGGTGCCTCTCAGATGAAGAAGAAGAAGATGCCAATGGCTGTAGCAATCCCTTTGAATCCTTTTCCTTTTCAGAACTTGGAGCTGTTGATTCCAATAAAGTTGCAACCAACACATGTGACCCAACTAGAGTAACTCAGCAGGAAGATAGCATTAACCGAAAAGATGAAGATGTCTTTGGTCCAGAGGGACCTAATCAATGTGAAGAGTCCAAGAGCAACAAAGGAGAAAGTCCACCATCACCAGAGGACTCTAATTGGACTGTATGTTATCAAAATAATTTGTTTCGAGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_285520.p1 GENE.S_Transcript_285520~~S_Transcript_285520.p1 ORF type:5prime_partial len:696 (+),score=154.23 S_Transcript_285520:2-2089(+)
FFTHSYFYFSRSPIFLLYYHYTNSHSTDPNVIVMMMKKNTIKPSTLKLANNNNGSTTREKREQKKSSPRSPLKVKDLNVSSSSSCSSCSTATTASSSIEGPRGCLRFFLSNHHHSSYKNACKKPKSFVPKTPKSAPIAKNLMKRGNNLENPEKPTSRKGQKLRKNPPLGSKFNLSGKLSSGSELKVFDNAVFTPVNKMGSGFSEDGFASHDKGFKLGEKDTNGGSDTCSPTICSPTIPPVQASVSPEIQGGSTSVLPATPTTCYGAGYVLSGVSDKRKCKPRGILTIGDNDLFGSSKAKVFDDRDEDKSVTRASLVMSPTEASMHWLLSPCDEKPSQGREDGGDDDGSGVRLGQCEGLVPFKSVGCSSSPVSSLGFSSQMFNNSSSTIATSDATTATTHSSRKSRSSFLNGDSTSEFRGLLGPSFDHLIRTPSPSSPVCTPSCKADVSPGQGKYRYDHAVEATPYLENSTGSGNVIQTPQSNSSSPKFGLSNLSRYEISRLWFECELDSVTEVLRRVSLSPEHQTPMDDSPKTSFEFNPLIKPASSIDFTLFRNAIDSQSPPGIPESLLHSLPESEVRISWREGLASRMFEMDELDCCRCLSDEEEEDANGCSNPFESFSFSELGAVDSNKVATNTCDPTRVTQQEDSINRKDEDVFGPEGPNQCEESKSNKGESPPSPEDSNWTVCYQNNLFRV*

Click here to download the sequence:
Link to NCBI Protein BLAST