Transcript Information: S_Transcript_285852.p1


Annotated TAIR IDATMG00520.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)MATR
Annotation TypeOrtholog
Chromosome PositionchrM:144294-146312 | Reverse length=672
E-Value2.7E-302
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0482144906636
Replicate 20.67588414399389
Replicate 30.80712192926042
Condition 2: 8 Hour
Replicate 10.97994134936497
Replicate 20.4405834524235
Replicate 30.69964488856613
Condition 3: 24 Hour
Replicate 10.71700930494292
Replicate 21.0414442956308
Replicate 30.44152375326243


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_285852.p1 GENE.S_Transcript_285852~~S_Transcript_285852.p1 ORF type:5prime_partial len:457 (+),score=-28.17,Intron_maturas2|PF01348.17|1.9e-14 S_Transcript_285852:3-1373(+)
GGGGACCAGAAAAGGCCTTTCGTTTTCCCCCCTTCGTCGGCCCTTGCCACCTTCCTTAACAAGCCCTCGAGCCTCCTTTTCGCTGCCTTCCTCATAGAAGCCGCCGGGTTGACCCCGAAGGCCGAATTCTATGGTAGAGAACGCTGTAATAATAATTGGGCCATGAGAGACCTTTTTAAGTATTGCAAAAGAAAGGGCCTGCTGATAGAGCTGGGCGAGGCAGCGATACTAGTTATCAGGTCAGAGAAAGGCCTGGCCCGTAAGCTGGCCCCCTTAAAAACCCATTACTTAATAAGGATTTGTTACGCGCGATATGCCGACGACTTACTATTGGGAATCGTGGGTGCCGTAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCACTTCCTACAATCCGGCCTGAACCTTTGGGTAGGCTCTGCGGGATCAACAACAATAGCTGCACGGAGTACGGTAGAATTCCTCGGTACGGTCATTCGGGAAGTCCCTCCGAAGAGGACTCCCATACAATTCTTGCGAGAGCTGGAGAAGCGTCTACGGGTAAAGCACCGTATCCATATAACTGCTTGCCACTTACGCTCTGCCATTCATTCCAAGTTTAGGAACCTAGGTAATAGTATCCCGGTCAAACAGCTGACGAAGGGGATGAGCAAAACAGGGAGTCTACTGGACGCGGTTCAACTAGCGGAAAGTCTTTCCACAGCTAGAGTAAGAAGTCCCCAAGTGAGCGTATTATGGGAGACCGTCAAGCACATCCGGCAAGGATCAAGGGAGATCTCGTTGTTGCATAGCTCAGGTCAGAGCAAGGTGCCATCGGACGTTCAACAGGCAGTCTCGCGATCGGGCATGAGTGTCCGGAAGTTGTCATTGTATACTCTCGCGGGTCGGAAGGCGGCGGGGGAAGGAGGGGGACACTGGGCGAGATCTATCAGCAGCGAATTCCCCATACAGATAGAAGCGCCTATCAAAAAGATACTCCGAAGGCTTCGAGATCGAGGTATCATTAGCCGAAGAAGACCCTGGCCAATCCACGTGGCCTGCTTGACGAACGTCAGCGACGGAGACATCGTAAATTGGTTCGCGGGCATCGCGATAAGTCTTCTGTCCTACTACAGGTGCTGCGACAACCTTTATCAAGTCCGAACGATTGTCGACCACCAGATCCGCTGGTCTGCAATATTCACCCTAGCCCACAAGCACAAATCCTCAGCGCGGAATATAATCCTAAAGTACTCCAAAGACTTAAATATAGTAAATCAAGAAGGTGGTAAGACCCTAGCAGAGTTCCCCAACAGCATAGAGCTTGGGAAGCTCGGACCCGGTCAAGATCCGAACAACAAAGAGCACTCAACTACTAGTCTAGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_285852.p1 GENE.S_Transcript_285852~~S_Transcript_285852.p1 ORF type:5prime_partial len:457 (+),score=-28.17,Intron_maturas2|PF01348.17|1.9e-14 S_Transcript_285852:3-1373(+)
GDQKRPFVFPPSSALATFLNKPSSLLFAAFLIEAAGLTPKAEFYGRERCNNNWAMRDLFKYCKRKGLLIELGEAAILVIRSEKGLARKLAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSGLNLWVGSAGSTTIAARSTVEFLGTVIREVPPKRTPIQFLRELEKRLRVKHRIHITACHLRSAIHSKFRNLGNSIPVKQLTKGMSKTGSLLDAVQLAESLSTARVRSPQVSVLWETVKHIRQGSREISLLHSSGQSKVPSDVQQAVSRSGMSVRKLSLYTLAGRKAAGEGGGHWARSISSEFPIQIEAPIKKILRRLRDRGIISRRRPWPIHVACLTNVSDGDIVNWFAGIAISLLSYYRCCDNLYQVRTIVDHQIRWSAIFTLAHKHKSSARNIILKYSKDLNIVNQEGGKTLAEFPNSIELGKLGPGQDPNNKEHSTTSLV*

Click here to download the sequence:
Link to NCBI Protein BLAST