Transcript Information: S_Transcript_28612.p1


Annotated TAIR IDAT5G26240.1
Annotated Gene Namechloride channel D
Annotated Gene Symbol(s)CLC-D, ATCLC-D
Annotation TypeOrtholog
Chromosome Positionchr5:9189622-9194347 | Forward length=792
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7053101703663
Replicate 26.6637220416281
Replicate 38.1101859772954
Condition 2: 8 Hour
Replicate 19.1108475063808
Replicate 28.7876901542588
Replicate 39.040054305086
Condition 3: 24 Hour
Replicate 18.51232549164
Replicate 27.6610067300329
Replicate 36.710090060829


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28612.p1 GENE.S_Transcript_28612~~S_Transcript_28612.p1 ORF type:5prime_partial len:639 (+),score=108.83,Voltage_CLC|PF00654.16|2.6e-83,CBS|PF00571.24|0.13,CBS|PF00571.24|6.9e-07 S_Transcript_28612:1-1917(+)
GGGATTGATGTTCATGGCATCCTTTTGTTTAGAACTTTAGTAGGAAAGGTGTTTGGAAGCATTGGCTCAGTGGGAGGTGGATTAGCTCTTGGAAAAGAAGGCCCTCTTGTTCACACCGGTGCTTGTATCGCTTCCCTTCTTGGACAAGGTGGATCAACAAAGTATCATTTGAGGTCAAGATGGCTTCAAGGTTTCAATAGTGATCGGGATCGGCGTGACCTAGTGACATGTGGCTGTGCAGCTGGAGTTGCAGCAGCTTTTAGAGCTCCAGTTGGTGGTGTATTATTTGCGCTGGAGGAGGTTACATCTTGGTGGAGGAGTCAGCTTATGTGGCGTGTCTTCTTCACTTCTGCTGTTGTCGCTGTTGTTGTGCGTACTGCAATGGCATGGTGTAAAAGCGGAAAATGTGGACACTTTGGTGCTGGTGGCTTCATAATATGGGATATATCAGATGGTCAAGAGGATTACTCATTTGCAGAGATGTTGCCAATGGCTGTTATTGGGGTAATAGGTGGTCTTCTTGGGGCTTTGTTTAATCAACTAACATATTATATTGCTTATTGGCGTCGAAACTATTTACACAAGAGGGGGACTCGAGTTAAAATCATTGAAGTCTGCCTTATTTCTGTGATAACCTCAGCAATCTCTTTTGGATTGCCGCTCTTAAGGAAGTGCAGTCCTTGCCCTGCATCTGAAGTTGAATGTCCCAATCCCCCAGGAGTGTATGGGAATTATGTAAATTTCTACTGTCGCAATGATAAGGAATACAATGACCTTGCAACCATTTTCTTCAATACTCAGGATGATGCTATCAGGAATCTGTTTAGCGCCAAAACATTTCACGAGTATAGTGCTCAAAGTTTGTTAGCCTTCTTGGTTATGTTCTACACATTAGCCGTAGTGACATTTGGCACAGCTGTTCCGGCTGGTCAATTTGTGCCTGGAATAATGATAGGATCAACTTATGGTCGTCTTGTTGGCATGTTTGTTGTCAGCTTCTACAAGAAGCCCAATATAGAAGAGGGAACGTATGCACTTCTGGGCGCTGCTTCCTTTTTAGGAGGCTCAATGCGAATGACGGTCTCTCTCTGTGTCATAATGGTTGAGATCTCTAATAACTTGAGGTTTCTACCTCTTATTATGCTTGTTCTTCTTATATCTAAGGCTGTTGGGGATGCTTTTAACGACGGTTTATACGAAGAACAGGCTCAATTGAGGAACATTCCATTGCTGGATTCAAGAGCAAAAAATGAGATGAGAAGGATGACTGCAAAAGAAGCTAGTGGTAGTCGAAAGGTTGTCAGTCTACCTCGTGTCATCAAGGTTGCGGATGTGGTGTCTATTCTGAGAACCAACAAGCACAATGGCTTTCCTGTGATAGATCACACAAGGAGTGGAGAAACACTTGTCATTGGGCTGATGATCCGCAGTCATTTATTGGTGCTGCTTCAGTCCAAGGTGGATTTCCAACACAGTCCTTTGCCCAGTGATTCAAGAGGTGGATCCTTCCCAATAAGGCATAATAATAGTGAATTCATCAAACCAGTTTCCAGTAAAGGGCTTACTCTGGATGATATTCATCTGAGTCAGGATGACTTGGAGATGTACATAGATCTTGCTCCGTTTTTGAACCCCTCACCTTATATTGTCCCTGAAGATATGTCACTGTCAAAGGTCTACAATCTGTTCCGTCAACTAGGATTAAGGCATTTACTGGTCGTTCCTCGACCTTCTCGTGTTGTAGGATTAATCACCCGAAAGGATTTGTTAATTGAGGGTGGTGAGGATTCAGAGACGGAACTCCAATCCACTAGTGTAAGATCTCAACGTTGTAAGCGAAGTTCTGCATTGAGAAGTGCAGATGTGGAGCAACCGCTTTTGAATGGTCTTTTGGGGCAAAATAATTTGTCAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28612.p1 GENE.S_Transcript_28612~~S_Transcript_28612.p1 ORF type:5prime_partial len:639 (+),score=108.83,Voltage_CLC|PF00654.16|2.6e-83,CBS|PF00571.24|0.13,CBS|PF00571.24|6.9e-07 S_Transcript_28612:1-1917(+)
GIDVHGILLFRTLVGKVFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRSRWLQGFNSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMAWCKSGKCGHFGAGGFIIWDISDGQEDYSFAEMLPMAVIGVIGGLLGALFNQLTYYIAYWRRNYLHKRGTRVKIIEVCLISVITSAISFGLPLLRKCSPCPASEVECPNPPGVYGNYVNFYCRNDKEYNDLATIFFNTQDDAIRNLFSAKTFHEYSAQSLLAFLVMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVSFYKKPNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEISNNLRFLPLIMLVLLISKAVGDAFNDGLYEEQAQLRNIPLLDSRAKNEMRRMTAKEASGSRKVVSLPRVIKVADVVSILRTNKHNGFPVIDHTRSGETLVIGLMIRSHLLVLLQSKVDFQHSPLPSDSRGGSFPIRHNNSEFIKPVSSKGLTLDDIHLSQDDLEMYIDLAPFLNPSPYIVPEDMSLSKVYNLFRQLGLRHLLVVPRPSRVVGLITRKDLLIEGGEDSETELQSTSVRSQRCKRSSALRSADVEQPLLNGLLGQNNLSS*

Click here to download the sequence:
Link to NCBI Protein BLAST