Transcript Information: S_Transcript_286143.p1


Annotated TAIR IDAT5G56930.1
Annotated Gene NameCCCH-type zinc finger family protein
Annotated Gene Symbol(s)emb1789
Annotation TypeHomolog
Chromosome Positionchr5:23027949-23030565 | Reverse length=675
E-Value4E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3436106762879
Replicate 22.7632456588668
Replicate 31.9128473824478
Condition 2: 8 Hour
Replicate 11.4189105103376
Replicate 21.225854719985
Replicate 31.9605574118085
Condition 3: 24 Hour
Replicate 12.6932048139089
Replicate 23.0602798410332
Replicate 34.5903133653147


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_286143.p1 GENE.S_Transcript_286143~~S_Transcript_286143.p1 ORF type:3prime_partial len:511 (-),score=127.74,zf-CCCH|PF00642.20|1.8e-05,zf-CCCH|PF00642.20|0.018,zf-CCCH|PF00642.20|1e-05,Torus|PF16131.1|1e-06,Torus|PF16131.1|0.0022,Torus|PF16131.1|0.024 S_Transcript_286143:3-1343(-)
ATGGCTATTGATGACAAGGACACTAGTGATCACAATACGGAGGGCCACAATGTCCAAGAAAATTTGTTAGATGTTCTTGCTAAGCATTCTGCTCCAGTTGAAAGCAATGTCTGTGGAGGACTGGATATTCAAGGGAACATGAACGAGGATGTAGTAGGCGAGAAGAAAGGGAAAGATATTGAAGTAAAGGGCTCAAATATTGGAGGTGATGTAGCTTCTGATGCTCAAGTGTCTGTGGAGAGAGATATCTCCAACTGTTTAGAAGTGGCAGAAAAGCTTCCAGGTACACATCCTGATCATGTTGGGAGAGAGGAGACAAACATTTGCAATGAGAAAGTTCCTCAGGATTTATCAGAAAAGGAAGGTTTAATTTTTTCCGTATCGATGAGTGAAGGCAAGGGAGGTTCTGCTTTAATGAGTTCTGTTGATATAGAGGAACACAAATCAGGAAGTCCTGTCAATCAAAAAACAAAGAAGCGTAAGAAGGCAGACCAAAAGGGTGTAAAATCAGGAAAAAGGAAGCTTATGTCTGCAGATGCCGAGGTTTCCAATATCACAAGATCTGGGAGCTCTGATAAATTAGTTCATGGGAAGATGCTGAAGCAAAATGTGTCTGGCAGAGGGAACTTGCCTACAACAAAGGTTGGCAAATGTTCGCCTAAGAGTATGGAGAATATTAAGTACACTCGAGAACAGCTCCTGCATCTTCAACAGATGGATGCTGTTTCCAAGGATATTTTGAAAGTTGTACAAGAAATCGGCGGCGAGTTATTTGGTGGAGGTCAGAATTGTGCCACCCGAGAATCAATTGAGGTCCGCGGCTTCAACGAGGAACAGCTAGGTGCTCCTACAGAGGAGAAGAAAGTGGAGGAAAAGGATCATGCTATGTTGAAGAATAAAAAACGGGGGTCTTCATCAACCGCAAAGAAGGAAAATAAAAAGAGGAAGAAAAGGCAGAAGCGAGCAGAAACTAACAGGAAACTTGGTGTCAAGAGGTTGAAGCTTAGACCACCTGTTTTTAAACCAAAAGTGGTGCCACCTTGTCGGCATTACCTCAAAGGAAGCTGCCATGAGGGTGAGAAATGCAAGTTTTCACATGATGTAATACCCCGAACGAAATCCACGCCTTGCTCTTATTTCGCACGCAACGTGTGCTTGAAAGGGGATGACTGTCCATTTGATCATCAGTTATCCAAGTATACCTGCACCAATTATGCGACTACAGGCTTCTGCAGTAGAGGTGATAGCTGCTTGTTTTCCCATAAGATTCAGGATAAGGAACAATCAGAATCCATTGAGGGTGTCTTTAAAGAGATCAAGTCACCGAGTCAACTTGATAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_286143.p1 GENE.S_Transcript_286143~~S_Transcript_286143.p1 ORF type:3prime_partial len:511 (-),score=127.74,zf-CCCH|PF00642.20|1.8e-05,zf-CCCH|PF00642.20|0.018,zf-CCCH|PF00642.20|1e-05,Torus|PF16131.1|1e-06,Torus|PF16131.1|0.0022,Torus|PF16131.1|0.024 S_Transcript_286143:3-1343(-)
MAIDDKDTSDHNTEGHNVQENLLDVLAKHSAPVESNVCGGLDIQGNMNEDVVGEKKGKDIEVKGSNIGGDVASDAQVSVERDISNCLEVAEKLPGTHPDHVGREETNICNEKVPQDLSEKEGLIFSVSMSEGKGGSALMSSVDIEEHKSGSPVNQKTKKRKKADQKGVKSGKRKLMSADAEVSNITRSGSSDKLVHGKMLKQNVSGRGNLPTTKVGKCSPKSMENIKYTREQLLHLQQMDAVSKDILKVVQEIGGELFGGGQNCATRESIEVRGFNEEQLGAPTEEKKVEEKDHAMLKNKKRGSSSTAKKENKKRKKRQKRAETNRKLGVKRLKLRPPVFKPKVVPPCRHYLKGSCHEGEKCKFSHDVIPRTKSTPCSYFARNVCLKGDDCPFDHQLSKYTCTNYATTGFCSRGDSCLFSHKIQDKEQSESIEGVFKEIKSPSQLDK

Click here to download the sequence:
Link to NCBI Protein BLAST