Transcript Information: S_Transcript_286146.p1


Annotated TAIR IDAT5G56930.1
Annotated Gene NameCCCH-type zinc finger family protein
Annotated Gene Symbol(s)emb1789
Annotation TypeHomolog
Chromosome Positionchr5:23027949-23030565 | Reverse length=675
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3024204685816
Replicate 20
Replicate 30.62872963921366
Condition 2: 8 Hour
Replicate 10.48466796175302
Replicate 20.25422555272417
Replicate 30
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 21.5452598802055
Replicate 30.28661414096723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_286146.p1 GENE.S_Transcript_286146~~S_Transcript_286146.p1 ORF type:internal len:88 (+),score=15.44,zf-CCCH|PF00642.20|8.9e-07 S_Transcript_286146:3-263(+)
CAGTTATCCAAGTATACCTGCACCAATTATGCGACTACAGGCTTCTGCAGTAGAGGTGATAGCTGCTTGTTTTCCCATAAGATTCAGGATAAGGAACAATCAGAATCCATTGAGGGTGTCTTTAAAGAGATCAAGTCACCGAGTCAACTTGATAAGTCAAACTCCAAACAGCAGCGTGATGGCCAAGCATCCTCTTCCAGATTTCCTAGTATAAATGTAGAGGAGAATTCAGTGACCCTGATCAATCAGCCTGGAAAAGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_286146.p1 GENE.S_Transcript_286146~~S_Transcript_286146.p1 ORF type:internal len:88 (+),score=15.44,zf-CCCH|PF00642.20|8.9e-07 S_Transcript_286146:3-263(+)
QLSKYTCTNYATTGFCSRGDSCLFSHKIQDKEQSESIEGVFKEIKSPSQLDKSNSKQQRDGQASSSRFPSINVEENSVTLINQPGKE

Click here to download the sequence:
Link to NCBI Protein BLAST