Transcript Information: S_Transcript_286396.p1


Annotated TAIR IDAT2G17695.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7684214-7685009 | Reverse length=205
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9064955941549
Replicate 23.6433964406905
Replicate 32.7071906177762
Condition 2: 8 Hour
Replicate 19.9779349190255
Replicate 26.1573895338697
Replicate 37.2356546915992
Condition 3: 24 Hour
Replicate 13.4070001774321
Replicate 21.2475492610833
Replicate 32.0825541251931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_286396.p1 GENE.S_Transcript_286396~~S_Transcript_286396.p1 ORF type:complete len:109 (-),score=8.47 S_Transcript_286396:35-361(-)
ATGCTTTCTCTATATTGGACTCGTCCATCTCCCAGTGATCAAAAAGCTTGCTTGGATAAGGCTGGCTCCTTAAATTTTGAATTTAAATATAAAGGAGAAACAGTTAGGTCATTATCTTCTCTGCAGGAAGATAAACAGCTCTCAAGGGAGGGTTTCTTCCTCAATCATGCTCGAATTAAGCTTGGTTCTGGGATAGACATATATGAGAAAGCAAAGAATGCACTTCAAAACTGGAGGTACATACGTATGTTTATACATATACATATAGCTATACACATTTGTAAAACACAAAAAATACTCCCTCTGTCATTTCTTATGTTTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_286396.p1 GENE.S_Transcript_286396~~S_Transcript_286396.p1 ORF type:complete len:109 (-),score=8.47 S_Transcript_286396:35-361(-)
MLSLYWTRPSPSDQKACLDKAGSLNFEFKYKGETVRSLSSLQEDKQLSREGFFLNHARIKLGSGIDIYEKAKNALQNWRYIRMFIHIHIAIHICKTQKILPLSFLMFP*

Click here to download the sequence:
Link to NCBI Protein BLAST