Transcript Information: S_Transcript_286402.p1


Annotated TAIR IDAT2G17695.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7684214-7685009 | Reverse length=205
E-Value1E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.703353610675
Replicate 225.416333570257
Replicate 315.786982087562
Condition 2: 8 Hour
Replicate 145.209827472322
Replicate 238.658554449448
Replicate 334.957990072169
Condition 3: 24 Hour
Replicate 116.252593317002
Replicate 212.691734482754
Replicate 320.984740945057


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_286402.p1 GENE.S_Transcript_286402~~S_Transcript_286402.p1 ORF type:complete len:125 (-),score=11.20,DUF1990|PF09348.6|1e-23 S_Transcript_286402:253-627(-)
ATGAGTTGGATGTTTGTTGAGCCTACGACCCAGATTGAAAGTGGGCAGAAGTTTTGTGTCTGTGCGAGGCAGATGGTACCATGGGTTATGATACCCTCTCAAGTGGTGTATGTTAATGAGAAAAAGAATGTTGACAACGTAAAAGCTTCCTTCAGCTTTGGCATTAGTAGTCTTCAAGGTTCCCTACTGGCCGGTGAAGAACGCTTTTCGGTTGAATTAGATGACAACGATCAAGTTTGGTATGAAGTCCTTTCCTTGTCAAAAGCTGAAGGAAATTTACTGTCTTTAATTCTGTATCCCTTCGTAAAGTATACACAAAAGTGTTTCGCAAAGGAGTCTGCTGACGCAATGTTTAAGAATGTATGTGTGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_286402.p1 GENE.S_Transcript_286402~~S_Transcript_286402.p1 ORF type:complete len:125 (-),score=11.20,DUF1990|PF09348.6|1e-23 S_Transcript_286402:253-627(-)
MSWMFVEPTTQIESGQKFCVCARQMVPWVMIPSQVVYVNEKKNVDNVKASFSFGISSLQGSLLAGEERFSVELDDNDQVWYEVLSLSKAEGNLLSLILYPFVKYTQKCFAKESADAMFKNVCVG*

Click here to download the sequence:
Link to NCBI Protein BLAST