Transcript Information: S_Transcript_286404.p1


Annotated TAIR IDAT2G17695.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7684214-7685009 | Reverse length=205
E-Value4.3E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.950061251768
Replicate 26.905832503775
Replicate 36.2975196383026
Condition 2: 8 Hour
Replicate 110.662695158566
Replicate 211.82252163888
Replicate 39.8780757193816
Condition 3: 24 Hour
Replicate 18.5248325816953
Replicate 26.7254400206234
Replicate 37.5871190486935


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_286404.p1 GENE.S_Transcript_286404~~S_Transcript_286404.p1 ORF type:5prime_partial len:246 (-),score=39.80,DUF1990|PF09348.6|2.7e-41 S_Transcript_286404:209-946(-)
GTTGATTCTAGGACGGAGGTAGTGTCTTTCATTTTATTGCGTGGACTTGTCACTGCTGAGCAATATTCAACCTTCATTCCCAACATAAGATTAAGATTATCTTTGCTTCTGACAGGTGAAATGGTTTTCTTATGTTGGACTCGCCCTTCTCCTAAGGATCAAAAGGCTTGTTTGACGAAGACCGGGTCCTTCAATTACAACTCTAAGCATGAGGGAGCTACAGCAAGGTCAGCATCTTCTCTTCAGGACGATAAGCAGCTTTCGGGGGAGGGTTTTTTACTCAATCATGCTCGTGTCCTGATTGGTTCTGGGCTAGATACATATGAGAAGGGAAAGGATGCTCTTCAAAATTGGAGGCATTTCCAAATGAAATGGACATTTGTTGAGCCGACAACTCCTATTAAAAATGGGGTGAAGTTTTGTGTTTGTGTCAAGGAGTTCCTACCGTGGTTGATGATGCCCCTTCAAGTGGTGTATGTTAATGAGAAAAGGAGTGCCGGAAAAGTGAAAGCCTCCTTCAGCTTTGGTAGTGGCACCCTTCAAGGGCACCTACTGGCTGGGGAAGAGCGCTTTTCAGTCGAGCTGGATGAGAACAATCAAGTTTGGTATGAAATACTTTCCTTTTCAAAGCCTGCCCATTTTCTTTCGTTTATCGGATATCAATATGTACAGTTTAGACAAAAGTATTTTGCGAAGGAGTCAACAGATGCTGTATTGAAACATCTATCTGCTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_286404.p1 GENE.S_Transcript_286404~~S_Transcript_286404.p1 ORF type:5prime_partial len:246 (-),score=39.80,DUF1990|PF09348.6|2.7e-41 S_Transcript_286404:209-946(-)
VDSRTEVVSFILLRGLVTAEQYSTFIPNIRLRLSLLLTGEMVFLCWTRPSPKDQKACLTKTGSFNYNSKHEGATARSASSLQDDKQLSGEGFLLNHARVLIGSGLDTYEKGKDALQNWRHFQMKWTFVEPTTPIKNGVKFCVCVKEFLPWLMMPLQVVYVNEKRSAGKVKASFSFGSGTLQGHLLAGEERFSVELDENNQVWYEILSFSKPAHFLSFIGYQYVQFRQKYFAKESTDAVLKHLSAH*

Click here to download the sequence:
Link to NCBI Protein BLAST