Transcript Information: S_Transcript_28643.p1


Annotated TAIR IDAT5G41350.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16542026-16543092 | Reverse length=212
E-Value7.2E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.783486678903
Replicate 224.058946707957
Replicate 319.057493953054
Condition 2: 8 Hour
Replicate 124.879622036655
Replicate 224.076370440849
Replicate 325.376009053549
Condition 3: 24 Hour
Replicate 123.613278820785
Replicate 222.987580313152
Replicate 324.261204618254


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28643.p1 GENE.S_Transcript_28643~~S_Transcript_28643.p1 ORF type:complete len:210 (+),score=47.46,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|9.4e-10,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|4.2e-08 S_Transcript_28643:308-937(+)
ATGGGAGGTTGTTGTTGCTGCTGTTCTTCTAGGAGATCTGAACCGATTAGGACTCCAACTTATTATTATTGCCCAAGAACCTCGGAGGAGCGTCTGCCGTTGTCAGCTAACCATGGCGAACCCGCTGGATTTTCAGTGGGGCTTGTGGTTGATACCAATCTGGACACTTCGAACCCAGACACATACACTCCACCTCCTGCTCCTATTCCCTATGATGTTGATTTTGGAAACCATCAGACACGACCTGGAAGTGGAGATAATTGCAGCAACAAGAGTAGCACTGTAGCTGATGCGACAGATGCTGGTTCTGCAGAGAACACTGGTGCTTCCTTAGAAACTCTGGAGGAGGATATAAAGGAAATAGACTGCAAAACGCAATCGATTTTGGAGCTCACCCCATCAAAGGATTCTGAAGATGATCTTAAAAAGCCTGTTGATCCAGTTGTCATAACGATAGAAGATGAAGATTGCCCAATATGTCTTGAAGAGTACACAGAGGAGAACCCAAAAATGCTTACTAAATGTGAACGTCATTTTCACCTTTGCTGCATTCTCGAGTGGATGGAAAGGAGTGAAAGTTGTCCTGTGTGTGATAAGGAAGTGGTGATTGATGAACTACTTGATAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28643.p1 GENE.S_Transcript_28643~~S_Transcript_28643.p1 ORF type:complete len:210 (+),score=47.46,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|9.4e-10,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|4.2e-08 S_Transcript_28643:308-937(+)
MGGCCCCCSSRRSEPIRTPTYYYCPRTSEERLPLSANHGEPAGFSVGLVVDTNLDTSNPDTYTPPPAPIPYDVDFGNHQTRPGSGDNCSNKSSTVADATDAGSAENTGASLETLEEDIKEIDCKTQSILELTPSKDSEDDLKKPVDPVVITIEDEDCPICLEEYTEENPKMLTKCERHFHLCCILEWMERSESCPVCDKEVVIDELLDS*

Click here to download the sequence:
Link to NCBI Protein BLAST