Transcript Information: S_Transcript_28657.p1


Annotated TAIR IDATCG01130.1
Annotated Gene NameYcf1 protein
Annotated Gene Symbol(s)YCF1.2
Annotation TypeOrtholog
Chromosome PositionchrC:123884-129244 | Reverse length=1786
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1134.30514067374
Replicate 266.412896257757
Replicate 368.693511904316
Condition 2: 8 Hour
Replicate 186.249610222106
Replicate 2124.64486853264
Replicate 3113.56654318519
Condition 3: 24 Hour
Replicate 174.567457142773
Replicate 282.59484411648
Replicate 386.20346296146


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28657.p1 GENE.S_Transcript_28657~~S_Transcript_28657.p1 ORF type:complete len:1867 (+),score=-42.26,Ycf1|PF05758.8|0,Ycf1|PF05758.8|9e+02,Ycf1|PF05758.8|7.3e+03,Ycf1|PF05758.8|1.6e+04 S_Transcript_28657:2751-8351(+)
ATGATTTTTCAATCTTTTCTACTGGGTAATCTAGTATTCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCAGATTATGGAAGAAGGAGAAGAAGGAACCGAGAAGAAGGTATCAGCAACAACGGGTTTTATTATGGGACAGCTCATGATGTTCATATCGATCTATTATACGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCCTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTAGCAGAAATTCAATGCGTAATCTCAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGCCAGATTAGTCAACATTTATATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGGTATTAGTCTGGATACAGCAAAATCGTTCTATTAGATCTAATGTACTTATTCGATCTAATAAGTACCTTGTGTCAAAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCTACTATTTAGGCAGAATGCCGTCACCCATTTTTACTAAGAAACTGAAAGAAACCTCAGAAATGAAAGAAAGTGAGGAAGAAACAGATGTAGAAATAGAAAAAACTTCCGAAACGAAGGAGACTAAACAGGAAGAAGAGGGATTCACCGAAGAAGATCCTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAAAGATCCGAGTGAATGGAAAGGACAAAACAAAGGATGAATTCCACTTTCACTTAAAAGAAGCATGCTATAAAAATAGCCCAACTTCTTATTCTGGGAATCAAGATATTTCGAAGTTAGAAATACTTAAAGAAGAAAATAAAAACTTCTTCTGGTTTGAAAAACCCCTTCTTTCTCTTCTTTTCGACTATAAACGTTGGAATCGTCCAACGCGATATATAAAAAACAATCGATTTGAAAATGCGATAAGAACTGAAATGTCACAATATTTTTTTTATACATGTCAAAATGATGGAAAACAAAGAATTTCTTTTACATATCCACCCAGTTTATCAATTTTCTGGGAAATGATACAAAGAAAGATTTCTTTGTCTAAAACAGAAAAATTCTTCTATGATGAACTTTACAATTATTGGATTTATACCAATGAACAAAAAAAGAACAGCTTAAGAAACGAAATAGTAAATCGAATTGGAGTTCTAGACAAAGGACTCTTTTATATAGATATACTCGAAAAAAAAACTCGATTATGCAACGATAAAATGAAAAAGCAATATTTACCAAAAATACATGATCCTTTCTTAAATGGATTTTATCGTGGGATAATAAAAAAATTTTTATTTTCACCAGCAGTAAAAAAAAATCCGATAGATGAAATCTTGATAAATAAGATTCATAGTATCCTTCGTACTGATTATAATTACCACGAATTTGCACAGAAAATAGATACGTTTGGGAAACAAAAATTACTATCAATCGAAATTTTGCATTTCGTGAGTCAATTTGCTGGGAAATCAACGTCGAATCTACAAGGAATTTCTTTAGATCGAGAAAATTTTTTAAAATTTTTAGCTGATGCAATCATACTTGATTCTTTCACTCAAACGAGTCAAAAAAAATCTTTTGGAATAAAAGAAATCAGTAAAAAAATTCCTCGCTGGTCATACAAATTAATTGATGACATAGAACAACAAGAAAGAGAAACTGAAGAAGAGGTAATGACGGAGCCTCAAATCCGTTCAAGGAAAGCTAGGCGTGTAGTAATTTTTACTAATATTGAAGATGATCCTACTATCAAAGAGACAAATAAACGGGATGAAGCAGACGATGTGAAATTGATACGTTATTCACAACAATCAGATTTTCGTCGAGACGTGATCAAAGGTTCTATGCGTGGTCAAAGACGTAAAACAGTTATTGGAAAACTGTTTCAAGCAAATATGCATTCCCCGCTTTTTTTAGACAGAATAGATAAATTGTCTTTTTTTTCTGTTAATCTTTCCAGACTAATTAAACAAATTTTTCTAAAAAAAACGAAAAAAAAACTACAATTTCCAATTTCGGATTATACCGAAAAAGAAATAAAGGAAAAGGATAAAAAGAAAAAAAACGAATACAAAAGAGAAGAAGAAAAAAAACGAGAAAAAACCCGAATACACATAAGTGAAACCTGGGATACTCTTACATTGGCTCAAGTAATTAGGGGTTTGACGTTAGTAAGTCAGTCAATTTTTAGAAAATATATTTTATTACCTTTATTGATAATAGCAAAAAATATTGGCCGTCTATTACTGCTCCAACGTGCTGAGTGGTCGGAGGATTTTAAAGAGTGGGGTAGAGAAATGCATGTTAAATGTACTTATAACGGTGTTCAATTATCAGAAACAGAATTTCCTAAAAATTGGTTAACAGAGGGTATTCAGATAAAGATACTATTTCCTTTCCGTCTAAAACCGTGGCATAAATCTAGAATACGACCTTCTCATCGGGATCAAATGAAAAAGAAAGAACAAAAAAATAAAAACCAAAAGGATTCGTTTTGTTTTTTAACAGTTTCTGGAATGGAAACGGAACTTCCTTTTGGTTCTCCTCTAAAACGACCTTCCTTTTTTAAACCTGTTTTTAAAGAACTAAAGAAAAAAATTCAAAAATTTCGAACTAAATCTTTAATAATTCTCAAAGAAAAATTCAAATTGTTTCTAAAGGTACCAAATGAAATAACAAAATGGATTATTCAAAGCCTTCCATTTTTAAAAAAAAATAAAAACAGATTTCGAATTGGAAATCCAATTCTAGTAGTTGGATTGAGAAAAGAATCGAGTGAAATAAAAAAAGAAAAAGATTTGATAACCAATAATCAGATAATTCACGAATCATCCATTCAAGCCCAATTAAAAAATTCGACAACTTATTCAGTGACAGAAAAAAAAATGAAAGATCTAGCTAATAGAACAAGGACAATCAGAAATCAAATCGAAAAAATTAAAAAAGACAAGAAAAAGGAATTACTTACTATAGAAAGAATCCTTAATCCCACCAAAACACGTTATGGTATTAAAAAATTAGACTCATACGAAAATATTAGTCAGATATTTAAAAGAAGAAATGCTCGATTAATCCGTAAATTGAGTTATTTTCTAAAATTGTTTAGAGAAAGAATCTACGTAGATCTATTTCTATATATTGTTGATATTCCCAGAATTAATACACAACTTTTTCTTGAATCGACAAAAAAATTAATTGATAAATCCATTTACAATACTGAGACAAATCAAGAAAGGATTGATACAACAAATAAAAATAAAATTCAATTTCTTTCGACTATAAAAAAATCACTTTTCCAATTTAGTAGTAATAATTTAAGGATTCATTCTGATTTATCTTTTTTGTCCCAAGCCTATGTATTTTTTAAATTATCACAAGCCAAAATTATTAACTTATATAAGTTAAGATCTAAGTTAAGATCTGTCTTTCAATATCATGAAACGTCTTTATTTCTAAAAAAAGAAATAAAAGATTATTTTGGAACACAAGGAATAACTCATTACAAACTAAGAACTAAGAAACTTCCAAATTCCGAAATGAACCCATGGAAAAACTGGTTAAAAAGTAATTATCAAGCCGATTTATCTCAAATAAAATGGTCTCGATTAGTACCACAAAAATGGCGAAATAAAGTCAATGAACATTATAGGGTTGAAAATAGAAATTTTAAAAACAAAAAAAAGAATGAATATGAAAAAGAACAATTAATTAATTATAATTACAAAAATGCCAAAAATTCTGAAGCCCATTTATTTTTCTTAACCGATATTTGTAAAAAAAACTATAGATATGATGTTTTATCATATAAATTTATTTATTTTGAAGATAAACAGGATTCATATAGTTATGAGTTACCATTCAAAGTAAATCAAAATCACGAATTTTCTTATCCTTATAATTACAACTTAATTGATATGTGGTGGAAGATCCCTATCACTAATTATTTAGAACTAACAAATATTATAGATATAAAAAAAAATACAGATAGAAAATATTTTGATTGGAAAATTATCGATTTTTGTCTTAAAAAGAAAGTCGACATTGGAACCTGGATCGATACCAGTATTAGCTATAATAAAAATACGAAAACTGAACCTAAGAATTATCAAATTGTTGATAAAATTGATAAGAAAGGTATTTTTTCTCACACAATTTATCAAGAAATCAATCGATGCCATCAAAAAAAAAACCTTTTTCTTTTTGATTGGATGGGAATGAACGAAGAAATACTAAGTAGTCCCATATCGAATCTGGAATCGTGGTTCTTCCCCGAATTTGTCTTATTTTATAATGCATATAAAATGAAACCGTGGGTTATACCAATTAATTTCCTTTTTTCAAATTTGAATATACGTATAAGTGAAAATTTTAGTGAAAATAAAAACATCAATAGAAAGAAAAAAAAGAATCCTTTTCTACCATTTCTACCATCAAATAAAAAAAAATCTCTTGAATTAGAGAATCGAAATCAAAACAAAAACGAACTCGTGGATCAAGCAGATTTTGGATTCGATATCCAAGAGAACTCTGAATTTGTTTTCTCAAACCAACAAAACGATTCAGATTCATATATGGAAAAAGGTAGAAATAAAAAACAAGACAAGAATAGTACAGAAACAGAACTCAATCTCTTACTGAAAAGGTATTTGCTTTTTCAATTGAGATGGGATGAGTCTTTGAATGAAAAATTGATGAATAATATCAAAGTCTATTGTCTCCTGCTTAGATTGATAAATCCAAGAGAAATTACTATATCCTCTATTGTAAGGAGAGAAATAAATCCGGAAATAATGCTGACTAAGAAAGATTTTTCTTATACAGAATTGCTGAAAAGGGGGATATTTTTTATTGAACCAGTTCGTCTGTCTGTAAAGGATGATGGACAATTTATTCTGTATCAAACCATAAGTATTTCATTGGTTCACAAGAGTAAACACCAAAAAAATCAAAAAACATACAATGAAAATGTTACTAAGAAGAATTTGGATCAATTGGTTTCACGACATCAAAAGATGACGAAAAAGCGAGACAAAAACAATTATGATTTGCGTGCTCTTGAAAATATTTTATCGCCTAGACGTCGTAGAGAATTAAGAATTCTAATTTGTTTCAATTCAAGGAATAATAATGGTATGGATAAAAACCCAATATGTTGCAATGACAATCGGGTAAAAAACTGTCGTCAATTTTTTGATGAAAGAAAAGATCTTGATCGAGATAAAAATCGACTTATAAAAATGAAATTCTTTCTTTGGCCCAATTATCGATTAGAAGATTTAGCTTGTATGAATCGTTATTGGTTTGATACTAATAATGGCAGCCATTTTAGTATATTAAGAATACGTATGTATCCACGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28657.p1 GENE.S_Transcript_28657~~S_Transcript_28657.p1 ORF type:complete len:1867 (+),score=-42.26,Ycf1|PF05758.8|0,Ycf1|PF05758.8|9e+02,Ycf1|PF05758.8|7.3e+03,Ycf1|PF05758.8|1.6e+04 S_Transcript_28657:2751-8351(+)
MIFQSFLLGNLVFLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQIMEEGEEGTEKKVSATTGFIMGQLMMFISIYYTPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTSRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLVWIQQNRSIRSNVLIRSNKYLVSKLRNSMARIFSILLFITCVYYLGRMPSPIFTKKLKETSEMKESEEETDVEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKEDPDKIDETEKIRVNGKDKTKDEFHFHLKEACYKNSPTSYSGNQDISKLEILKEENKNFFWFEKPLLSLLFDYKRWNRPTRYIKNNRFENAIRTEMSQYFFYTCQNDGKQRISFTYPPSLSIFWEMIQRKISLSKTEKFFYDELYNYWIYTNEQKKNSLRNEIVNRIGVLDKGLFYIDILEKKTRLCNDKMKKQYLPKIHDPFLNGFYRGIIKKFLFSPAVKKNPIDEILINKIHSILRTDYNYHEFAQKIDTFGKQKLLSIEILHFVSQFAGKSTSNLQGISLDRENFLKFLADAIILDSFTQTSQKKSFGIKEISKKIPRWSYKLIDDIEQQERETEEEVMTEPQIRSRKARRVVIFTNIEDDPTIKETNKRDEADDVKLIRYSQQSDFRRDVIKGSMRGQRRKTVIGKLFQANMHSPLFLDRIDKLSFFSVNLSRLIKQIFLKKTKKKLQFPISDYTEKEIKEKDKKKKNEYKREEEKKREKTRIHISETWDTLTLAQVIRGLTLVSQSIFRKYILLPLLIIAKNIGRLLLLQRAEWSEDFKEWGREMHVKCTYNGVQLSETEFPKNWLTEGIQIKILFPFRLKPWHKSRIRPSHRDQMKKKEQKNKNQKDSFCFLTVSGMETELPFGSPLKRPSFFKPVFKELKKKIQKFRTKSLIILKEKFKLFLKVPNEITKWIIQSLPFLKKNKNRFRIGNPILVVGLRKESSEIKKEKDLITNNQIIHESSIQAQLKNSTTYSVTEKKMKDLANRTRTIRNQIEKIKKDKKKELLTIERILNPTKTRYGIKKLDSYENISQIFKRRNARLIRKLSYFLKLFRERIYVDLFLYIVDIPRINTQLFLESTKKLIDKSIYNTETNQERIDTTNKNKIQFLSTIKKSLFQFSSNNLRIHSDLSFLSQAYVFFKLSQAKIINLYKLRSKLRSVFQYHETSLFLKKEIKDYFGTQGITHYKLRTKKLPNSEMNPWKNWLKSNYQADLSQIKWSRLVPQKWRNKVNEHYRVENRNFKNKKKNEYEKEQLINYNYKNAKNSEAHLFFLTDICKKNYRYDVLSYKFIYFEDKQDSYSYELPFKVNQNHEFSYPYNYNLIDMWWKIPITNYLELTNIIDIKKNTDRKYFDWKIIDFCLKKKVDIGTWIDTSISYNKNTKTEPKNYQIVDKIDKKGIFSHTIYQEINRCHQKKNLFLFDWMGMNEEILSSPISNLESWFFPEFVLFYNAYKMKPWVIPINFLFSNLNIRISENFSENKNINRKKKKNPFLPFLPSNKKKSLELENRNQNKNELVDQADFGFDIQENSEFVFSNQQNDSDSYMEKGRNKKQDKNSTETELNLLLKRYLLFQLRWDESLNEKLMNNIKVYCLLLRLINPREITISSIVRREINPEIMLTKKDFSYTELLKRGIFFIEPVRLSVKDDGQFILYQTISISLVHKSKHQKNQKTYNENVTKKNLDQLVSRHQKMTKKRDKNNYDLRALENILSPRRRRELRILICFNSRNNNGMDKNPICCNDNRVKNCRQFFDERKDLDRDKNRLIKMKFFLWPNYRLEDLACMNRYWFDTNNGSHFSILRIRMYPR*

Click here to download the sequence:
Link to NCBI Protein BLAST