Transcript Information: S_Transcript_28658.p1


Annotated TAIR IDATCG00680.1
Annotated Gene Namephotosystem II reaction center protein B
Annotated Gene Symbol(s)PSBB
Annotation TypeOrtholog
Chromosome PositionchrC:72371-73897 | Forward length=508
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 175.551643978066
Replicate 240.484568657601
Replicate 374.423143252879
Condition 2: 8 Hour
Replicate 174.366537942851
Replicate 285.971190450501
Replicate 3112.23275359794
Condition 3: 24 Hour
Replicate 153.217397894571
Replicate 259.175256551995
Replicate 378.78791867217


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28658.p1 GENE.S_Transcript_28658~~S_Transcript_28658.p1 ORF type:complete len:509 (+),score=47.59,PSII|PF00421.15|1.2e-262 S_Transcript_28658:1526-3052(+)
ATGGGTTTGCCTTGGTATCGTGTTCATACTGTTGTATTGAATGATCCCGGCCGGTTAATTTCTGTACATATAATGCATACAGCTCTGGTTGCTGGTTGGGCCGGTTCGATGGCTCTATATGAATTAGCAGTTTTTGATCCCTCTGACCCCGTTCTTGATCCAATGTGGAGACAGGGTATGTTTGTTATACCTTTCATGACTCGTTTAGGAATAACTAATTCATGGGGCGGTTGGAGTATTACAGGAGGGACTATAACGGATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCGCATATTGTGTTTTCTGGCTTGTGCTTTTTGGCAGCTATTTGGCATTGGGTGTATTGGGATCTCGAAATTTTTTCTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCTAAGATTTTTGGAATTCATTTATTTCTTTCCGGGGTGGCTTGTTTTGGTTTTGGTGCATTTCATGTAACAGGATTGTATGGTCCTGGAATATGGGTGTCCGATCCTTATGGGCTAACTGGAAAAGTACAACCTGTAAGTCCAGCATGGGGCGTGGAAGGTTTTGATCCTTTTATTCCAGGAGGAATAGCCTCTCACCATATTGCAGCAGGGACATTGGGCATATTAGCAGGTCTATTCCATCTTAGTGTCCGCCCCCCTCAGCGTCTATACAAGGGATTACGTATGGGAAATATTGAAACCGTTCTTTCGAGTAGTATCGCTGCTGTGTTTTTTGCAGCTTTTGTTGTTGCCGGAACTATGTGGTATGGTTCAGCAACTACCCCAATTGAATTATTTGGTCCCACTCGTTATCAATGGGATCAGGGATACTTTCAGCAAGAAATATATCGAAGAGTAAGTGCTGGGCTAGCCGAAAATCAAAGTTTATCAGAAGCTTGGTCTAAAATTCCCGAAAAATTAGCTTTTTATGATTACATTGGGAATAATCCGGCAAAAGGAGGATTATTTAGAGCGGGCTCAATGGACAATGGCGATGGAATAGCTGTTGGATGGTTAGGACACCCAATTTTTAGAGATAAAGAAGGACGCGAACTCTTTGTCCGACGTATGCCGACTTTTTTTGAAACATTTCCAGTCGTTTTGATAGATGGAGACGGAATTGTTAGAGCTGACGTTCCTTTTAGAAGAGCGGAATCTAAGTATAGTGTTGAACAAGTAGGTGTAACTGTTGAGTTTTATGGTGGCGAACTCAACGGAGTCAGTTATAGTGATCCTGCTACTGTGAAAAAATATGCTAGACGTGCTCAATTGGGTGAAATTTTCGAATTAGATCGTGCTACTTTGAAATCTGATGGTGTTTTTCGTAGTAGTCCAAGGGGTTGGTTTACTTTTGGGCATGCTTCCTTTGCCCTACTCTTCTTCTTCGGACACATTTGGCATGGGGCTAGAACCTTGTTCAGAGATGTTTTTGCTGGTATTGACCCAGATTTGGATGTTCAAGTAGAATTTGGAGCATTCCAAAAACTTGGAGATCCAACTACAAGAAGACAAGGAGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28658.p1 GENE.S_Transcript_28658~~S_Transcript_28658.p1 ORF type:complete len:509 (+),score=47.59,PSII|PF00421.15|1.2e-262 S_Transcript_28658:1526-3052(+)
MGLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITDPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFSDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVSPAWGVEGFDPFIPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLIDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDVQVEFGAFQKLGDPTTRRQGV*

Click here to download the sequence:
Link to NCBI Protein BLAST