Transcript Information: S_Transcript_286948.p1


Annotated TAIR IDAT2G40830.2
Annotated Gene NameRING-H2 finger C1A
Annotated Gene Symbol(s)RHC1A
Annotation TypeOrtholog
Chromosome Positionchr2:17043642-17044628 | Forward length=328
E-Value5.7E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.954617047521
Replicate 26.8417709777659
Replicate 36.6830820651375
Condition 2: 8 Hour
Replicate 13.2693978186545
Replicate 24.2093373747221
Replicate 33.1193923324363
Condition 3: 24 Hour
Replicate 15.7847078232932
Replicate 25.7646628748201
Replicate 35.360782957185


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_286948.p1 GENE.S_Transcript_286948~~S_Transcript_286948.p1 ORF type:3prime_partial len:287 (-),score=46.12,zf-RING_2|PF13639.2|1.2e-12,zf-rbx1|PF12678.3|1.4e-07,zf-RING_11|PF17123.1|8.9e-08,zf-RING_11|PF17123.1|6.7e+03,zf-C3HC4_2|PF13923.2|4.5e-07 S_Transcript_286948:3-791(-)
ATGGAAGCTTTGGACTCTATGATGCTTCGTAATAACCCTGAACGTCGATTTGGATTGATGGAAGCATTGGATGCTTTTATAGGTCAAAGGAGGAGATATGGTGTGGAGGCGGAGCGCAGTCCTTGGTTGATTTTTCAAGGACAGTTACCTGGTAGGATGCCTAGGAGTGAACGGTTTGAGATGTTCTTTAATGGAGGACCGGGGATTGGGTATGCTCCCTATGGATTTCGGGATGGTCCTGATCAATTGTATGGAATTATGGAAGCTTTGGACTCTATGATGCTTCGTAATAACCCTGAACGTCGATTTGGATTGATGGAAGCATTGGATGCTTTTATAGGTCAAAGGAGGAGATATGGTGTGGAGGCGGAGCGCAGTCCTTGGTTGATTTTTCAAGGACAGTTACCTGGTAGGATGCCTAGGAGTGAACGGTTTGAGATGTTCTTTAATGGAGGACCGGGGATTGGGTTCAGTCGAGGCAATAATGGTGATTTATTTGTTGGGCCGGGTTTGCAGGAGTTGATAGAGCAGCTTATGACTGATCGACAGGGTCCACCACCCGCACCACGTTCTGCTATTGATGCAATGCCTACTGTCAAGATCACTCGTGCACATCTGCAGACTGATTCCCATTGCCCCGTTTGTAAAGACCAATTCGAGTTGGGAACTGAAGTAAGACAGATGCCATGTAACCACATATATCACTCTGATTGTATTGTCCCTTGGTTGGTTCAGCACAATTCGTGCCCCGTTTGTCGCCATGTATTGGGCTCTAGCCCTCCCAGTCGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_286948.p1 GENE.S_Transcript_286948~~S_Transcript_286948.p1 ORF type:3prime_partial len:287 (-),score=46.12,zf-RING_2|PF13639.2|1.2e-12,zf-rbx1|PF12678.3|1.4e-07,zf-RING_11|PF17123.1|8.9e-08,zf-RING_11|PF17123.1|6.7e+03,zf-C3HC4_2|PF13923.2|4.5e-07 S_Transcript_286948:3-791(-)
MEALDSMMLRNNPERRFGLMEALDAFIGQRRRYGVEAERSPWLIFQGQLPGRMPRSERFEMFFNGGPGIGYAPYGFRDGPDQLYGIMEALDSMMLRNNPERRFGLMEALDAFIGQRRRYGVEAERSPWLIFQGQLPGRMPRSERFEMFFNGGPGIGFSRGNNGDLFVGPGLQELIEQLMTDRQGPPPAPRSAIDAMPTVKITRAHLQTDSHCPVCKDQFELGTEVRQMPCNHIYHSDCIVPWLVQHNSCPVCRHVLGSSPPSR

Click here to download the sequence:
Link to NCBI Protein BLAST