Transcript Information: S_Transcript_28712.p1


Annotated TAIR IDAT5G55610.1
Annotated Gene Nameunknown protein; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22525981-22527858 | Forward length=329
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.41429349332827
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28712.p1 GENE.S_Transcript_28712~~S_Transcript_28712.p1 ORF type:5prime_partial len:162 (+),score=29.50 S_Transcript_28712:3-488(+)
GCTGCAACTTGGACAGATGATATCATCTCCAAGGATCATGATGTTCACATCTCTAAGGATGATGAGGTCCTTGGATATGTTTTTGAGCCGGATACTCTGGGGCATGTGGCAAAAGTATATAACATTGAGCTAAAGCCACTTCTCTCTGCCTTCCAATTGAGGACATTTGGAATCACAGCCTTGAGATCATTTTTGATGTATTATTTACCACTTTTGGAGCCCCGTACAACGTTAGAAGAGGATGATGAAGACTTCCTTGCTGACAGTCCAGAACAAAACCGTGTAGATTATGTTACTCCCTTCCACAAGTCAGTAAAGCAAATAATCCGTGAGAGTACCGTGCTAACTACTAGAAGGGTCTTGGAAAGACTTGCTGTCTCTTATTTTTCACAACGAATGGCATGGAAGCTTCTCAAAGATGCTCCCAATCTGCCATGCGAAAGGCCCAACGAGGAATGCCAACAACTCGTTACTGCTATTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28712.p1 GENE.S_Transcript_28712~~S_Transcript_28712.p1 ORF type:5prime_partial len:162 (+),score=29.50 S_Transcript_28712:3-488(+)
AATWTDDIISKDHDVHISKDDEVLGYVFEPDTLGHVAKVYNIELKPLLSAFQLRTFGITALRSFLMYYLPLLEPRTTLEEDDEDFLADSPEQNRVDYVTPFHKSVKQIIRESTVLTTRRVLERLAVSYFSQRMAWKLLKDAPNLPCERPNEECQQLVTAIV*

Click here to download the sequence:
Link to NCBI Protein BLAST