Transcript Information: S_Transcript_287166.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value8E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4677731202847
Replicate 25.8917676659272
Replicate 35.8681432993274
Condition 2: 8 Hour
Replicate 110.42036117769
Replicate 28.0081049108112
Replicate 37.3878789994538
Condition 3: 24 Hour
Replicate 18.688305933759
Replicate 26.6961261475572
Replicate 37.1653535241807


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_287166.p1 GENE.S_Transcript_287166~~S_Transcript_287166.p1 ORF type:5prime_partial len:176 (-),score=25.44,zf-RVT|PF13966.2|1.8e-16,zf-RVT|PF13966.2|6.3e+02 S_Transcript_287166:198-725(-)
GAGTATATCAGAGATTTGGAAGCAACTGTGGTTCAAGGGAAGCTCTGCATCAGGAAAGTCTATTTCTCTTTATTAGAGGAGCTCCCTAAAGTACCATGGAAGAGGATGATTATCTCTAATAGGGCTCGACCTAGAGCTGTGATGACTTTGTGGCTGGTTATGTGGATAAGACTCCTAACAGCTGATAGGTTGAAGTCTTGGGGTATGTCTGTTAATGATAAGTGTGTCTTTTGCAAGGACAACACTGAGACCTTAGACCATTTAATGTATGAATGTTCCTTTGCTCACTCACTCTGGCAACAGATTTTTGCTTGGCAGAGGGTGAACCCAGGGGGAAGAGTTCAGGATATTATTAACAACATGGCTAAGAAGCAAACGGGGAAGGCCTGCTCATTCATTGTGGCAGTGGCAGAGACTGTGCATGCATTGTGGTTAGAACGAAATAAAAGAGTGTTTGATATGGTGGAGCAGACTGTTGATCAACTGTATAGAGACATACAGTTCCATGTCTATTGTCGCATAGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_287166.p1 GENE.S_Transcript_287166~~S_Transcript_287166.p1 ORF type:5prime_partial len:176 (-),score=25.44,zf-RVT|PF13966.2|1.8e-16,zf-RVT|PF13966.2|6.3e+02 S_Transcript_287166:198-725(-)
EYIRDLEATVVQGKLCIRKVYFSLLEELPKVPWKRMIISNRARPRAVMTLWLVMWIRLLTADRLKSWGMSVNDKCVFCKDNTETLDHLMYECSFAHSLWQQIFAWQRVNPGGRVQDIINNMAKKQTGKACSFIVAVAETVHALWLERNKRVFDMVEQTVDQLYRDIQFHVYCRIG*

Click here to download the sequence:
Link to NCBI Protein BLAST