Transcript Information: S_Transcript_28717.p1


Annotated TAIR IDAT5G55530.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22494439-22495656 | Forward length=405
E-Value3.8E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.608440545063
Replicate 266.545867577412
Replicate 366.299928559796
Condition 2: 8 Hour
Replicate 1118.72121229793
Replicate 2114.6557242786
Replicate 3118.42137558323
Condition 3: 24 Hour
Replicate 167.253923709468
Replicate 265.525695969578
Replicate 360.836505254933


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28717.p1 GENE.S_Transcript_28717~~S_Transcript_28717.p1 ORF type:complete len:432 (+),score=103.58,C2|PF00168.26|2.2e-09 S_Transcript_28717:1350-2645(+)
ATGGATTCTCCACAATCTGTTGTGTCACCATTCAAGAACCTCACTGTCAGTGGTGCTGAGCCGGAGAGGCAGAGATCTGATGTTTATGTTAGGGGTTCTGCTCAAAAGTCTAATGGAGCGGACAATAAGGGGGTGAACAATCATAACTCAGAAGACTTCATTGGTGCCCTTGATGTGTATATACATCAGGCAAGGGATATTCACAACATCTGCATTTATCATAAGCAAGATGTTTATGCTAAATTTTGCCTGACTAGTGATCCTGAAAATGCTGTATCCACCCAAACTATCAATGGTGGTGGTCAGAACCCTGTCTTCAATCAAAGTGTCAGGCTCAATGTTAGGACCGTAGAATCATCCTTAAAATGTGAGATTTGGATGCTTAGCCGTGTCAGAAACTACCTCGAAGACCAGCTACTAGGGATTGCTCTTGTGCCATTGTCAGAAGTTCTTATCAAGAACGGAAATGTGGAGAAGGAATTCATCCTTTCTTCATCAGATCTCTTCCATGCTCCAGCCGGGTTTGTCAAATTGTCTGTCTCATACTCCGGTGCTTCTCCTGATGTCATGGCGATTCCTAAGCTCCCTTCAGATGCTGAGAAAGTGGTGCAGGAAGCAGAAACTGTAGACTCAGTCGCGAGTGATTTTGACAAGATTGAGTTTCCTGACCCCAATATTGTGAATGAAAACCAAATGATGGTGTCTGAGTATTTTGGGATCTCGTGTAATAGCATTGATTCTCAAGCCACCGAGAGTTTGGTTTCATCAGATACCGAGAGTCACGAGCTTGGGGTTCGGGTTGTGGAGAGCTTCGCGGCAAACAGTGAGGAGTCCAAGCCACTTCCCAGAGCTGACTCGCCTGCTAGCAGTGTTTCGACAAATGGCTCTCCATCTGTTTGTCTTCCTACAAGTTCTCAATCTTCCGAGACTCCAGTTACTTCAAAGTCTCCAGGCCAGGAGCATGTTTCTCCTCTGAAGGATGACAAGAAAGATATCGGAGATGGTGCTGAGAGTGAGTCATCCAATGTGCACGAACCACCAAAGGCGACGTTTGTAAAGCCCCTTGTTACAGCGAATGTAGAGCCCGAGGAGAAGTTAGTGCAACAGGACATTGTGGATATGTACATGAAGAGTATGCAGCAGTTTACTGAGTCCTTAGCTAAGATGAAACTTCCAATGGATCTCGGGTCTGATCCAGTCAAATCAGGGAACTCAAGTCCAAGCTCTGATCAGAAATCGCAGACACCCAAGAGCTCTGGATCCCGAGTGTTCTATGGTAGCAGGGCTTTCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28717.p1 GENE.S_Transcript_28717~~S_Transcript_28717.p1 ORF type:complete len:432 (+),score=103.58,C2|PF00168.26|2.2e-09 S_Transcript_28717:1350-2645(+)
MDSPQSVVSPFKNLTVSGAEPERQRSDVYVRGSAQKSNGADNKGVNNHNSEDFIGALDVYIHQARDIHNICIYHKQDVYAKFCLTSDPENAVSTQTINGGGQNPVFNQSVRLNVRTVESSLKCEIWMLSRVRNYLEDQLLGIALVPLSEVLIKNGNVEKEFILSSSDLFHAPAGFVKLSVSYSGASPDVMAIPKLPSDAEKVVQEAETVDSVASDFDKIEFPDPNIVNENQMMVSEYFGISCNSIDSQATESLVSSDTESHELGVRVVESFAANSEESKPLPRADSPASSVSTNGSPSVCLPTSSQSSETPVTSKSPGQEHVSPLKDDKKDIGDGAESESSNVHEPPKATFVKPLVTANVEPEEKLVQQDIVDMYMKSMQQFTESLAKMKLPMDLGSDPVKSGNSSPSSDQKSQTPKSSGSRVFYGSRAFF*

Click here to download the sequence:
Link to NCBI Protein BLAST