Transcript Information: S_Transcript_28722.p1


Annotated TAIR IDAT5G15320.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4977647-4978658 | Forward length=53
E-Value5.6E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.298716956162
Replicate 245.34004459526
Replicate 324.364715559986
Condition 2: 8 Hour
Replicate 135.803178238856
Replicate 233.660396118488
Replicate 329.724851706029
Condition 3: 24 Hour
Replicate 125.051471892883
Replicate 213.930966748764
Replicate 343.502241726255


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28722.p1 GENE.S_Transcript_28722~~S_Transcript_28722.p1 ORF type:5prime_partial len:109 (+),score=18.67 S_Transcript_28722:2-328(+)
CCAGGTATAGAAAGAAATGGGAGCACCTTTTTTTATGGAAATAAAATTTTTCGGCTGTTTTTTTGGGGGTTTTTCATTTTACATTTTAATTTCTCTCTCACAGTCTCAGATTCTCTCTCTCATTCTCTGAATCTCAGATCGGAAGAAATGGCACCAGCTCTACCTCAGTTTTACAGCGGCACCAGCACTCTCGCTTTGGTTGCTCGTGTATCGGCTTTCACTGCTGGGATGGTCTATGGCAACATGAAGCTCAAAGTTCTCAAGATGAAGGCCAAGTCTCACCAGAAAGCTGAAGCCAAGAAAACTGATGCCAAGGGTCACCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28722.p1 GENE.S_Transcript_28722~~S_Transcript_28722.p1 ORF type:5prime_partial len:109 (+),score=18.67 S_Transcript_28722:2-328(+)
PGIERNGSTFFYGNKIFRLFFWGFFILHFNFSLTVSDSLSHSLNLRSEEMAPALPQFYSGTSTLALVARVSAFTAGMVYGNMKLKVLKMKAKSHQKAEAKKTDAKGHH*

Click here to download the sequence:
Link to NCBI Protein BLAST