Transcript Information: S_Transcript_28732.p1


Annotated TAIR IDAT2G14740.1
Annotated Gene Namevaculolar sorting receptor 3
Annotated Gene Symbol(s)ATVSR3, VSR3, VSR2;2, BP80-2;2
Annotation TypeOrtholog
Chromosome Positionchr2:6308895-6312303 | Forward length=628
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 174.357394960559
Replicate 281.139724489036
Replicate 377.569683999421
Condition 2: 8 Hour
Replicate 1117.15552479255
Replicate 2112.28135355033
Replicate 3119.24809084673
Condition 3: 24 Hour
Replicate 177.556205851827
Replicate 274.405721024235
Replicate 370.867599609972


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28732.p1 GENE.S_Transcript_28732~~S_Transcript_28732.p1 ORF type:5prime_partial len:636 (+),score=127.73,PA|PF02225.18|3.1e-15,PA|PF02225.18|3.6e+03 S_Transcript_28732:3-1910(+)
CAAAAAAAAAAAAAAACAAAGATGAAACTCCGAAATCCCCCTTTTCTAGGGTTTCTACTCATCCTAACAATACTATCACCCACCTCAATCACAGCCAGATTCGTGGTGGAAAAGAACAACTTAAGAGTAACAGCACCAGACAGCATCAAGGGAACCTACGACAGCGCTATTGGCAACTTCGGGATTCCTCAATATGGGGGTAGTATGGCTGGTACTGTTGTTTATCCTAAGGATAATCGTAAAGGCTGTAAGGAGTTCGATGATTACGGGATTTCCTTCAAGAAGAAGCCTGGTGCTATGCCTACTGTCGTTTTGGTTGATCGTGGAGATTGCTTTTTCGCTCTGAAGGTGTGGAATGCACAAAAAGCTGGGGCTGCTGCTGTGCTAGTTGCAGATGATGTTGAGGAAGCATTGATAACCATGGACACACCTGAAGAAGACAATTCATCTGCACAGTACATTGAGAACATAACTATTCCCTCTGCACTTATTGAAAGGAGCTTTGGTGAAACACTGAAGAAAGCATTTAACAACGGGGATATGGTTAATGTGAATCTTGATTGGAGAGAAGCTGTTCCTCACCCTGATGATCGAGTGGAATATGAACTATGGACTACTAGCAACGATGAATGTGGAGTCAAATGTGAGATGTTGATGTCCTTTATCAAGGAGTTTAAGGGTGTTGCTCAGATACTTGAGAAAGGTGGTTATACTATGTTCACACCGCATTACATCACTTGGTACTGCCCTCAGGCATTTACCATAAGCAAACAGTGCAAGTCTCAGTGCATTAATCATGGAAGATATTGTGCACCAGATCCCGAGCAAGATTTCAGCAAAGGTTATGATGGTAAAGATGTTGTAATTGAGAACTTGAGGCAACTCTGCGTTTTTAGAGTAGCAAATGAGACGAAAAAACCCTGGGTTTGGTGGGACTATGTCACCGATTTCCAGATTAGATGCCCCATGAAGGATAAAAAATACACTAAGGATTGTGCTGAGGGAGTAATCAAATCATTGGGATTGGATATGAAGAAGATAGATAAATGCATGGGTGACCCTGATGCTGATGCTGAGAACTCTGTCCTGAAAGAGGAACAGGAGGCCCAAATTGGCAAAGGAGCTAGGGGTGATGTTACCATTTTGCCTACACTTGTCGTCAACAATCGTCAATACCGAGGGAAGTTGGAGAAAGGAGCTGTGTTGAAGGCCATTTGCTCTGGTTTTGAGGAAACTACTGAACCTGTTGTTTGCTTGAGTGATGATATCGAGACAAATGAGTGTCTGGACAACAATGGGGGTTGTTGGCAAGATAAAGCAGCCAACATCACTGCTTGCAAGGATACATTCCGTGGAAGAGTATGTGAGTGTCCCCTTGTAAATGGTGTGCAGTTTAAAGGAGATGGCTACAGTTCTTGCAAAGCAAGTGGACCTGGTAAGTGCAGCATAAACCATGGAGGCTGCTGGCATGAAACTCGAAATGGGCAGACCTTTACTGCTTGTCTGGACCATGGTGATAAGTGCAAGTGTCCTTCAGGGTTCAAGGGTGATGCTGTGAACACTTGTGAAGACATTGATGAATGCAAAGAGAAAACAGCCTGTCAGTGCCCTGAATGCAGTTGTAAGAATACGTGGGGTAGCTATGATTGCTCATGCAGTGGGGGACTGCTGTACATTAAAGACCATGATACCTGCATAAGCAAAACAGCTGCTGAGACAAGGTCAGCCTGGGCAGCTGCATGGGTTATTTTACTAGGTCTGGGTATGGCTGCTGGTGGGGGATACCTTATTTACAAATACAGAATCAGGCAATACATGGATTCAGAAATCAGAGCTATAATGGCGCAGTACATGCCTTTGGACAGTCAGGTCGAAGTTCCAAACCATTATAGTGACAATCGTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28732.p1 GENE.S_Transcript_28732~~S_Transcript_28732.p1 ORF type:5prime_partial len:636 (+),score=127.73,PA|PF02225.18|3.1e-15,PA|PF02225.18|3.6e+03 S_Transcript_28732:3-1910(+)
QKKKKTKMKLRNPPFLGFLLILTILSPTSITARFVVEKNNLRVTAPDSIKGTYDSAIGNFGIPQYGGSMAGTVVYPKDNRKGCKEFDDYGISFKKKPGAMPTVVLVDRGDCFFALKVWNAQKAGAAAVLVADDVEEALITMDTPEEDNSSAQYIENITIPSALIERSFGETLKKAFNNGDMVNVNLDWREAVPHPDDRVEYELWTTSNDECGVKCEMLMSFIKEFKGVAQILEKGGYTMFTPHYITWYCPQAFTISKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVIENLRQLCVFRVANETKKPWVWWDYVTDFQIRCPMKDKKYTKDCAEGVIKSLGLDMKKIDKCMGDPDADAENSVLKEEQEAQIGKGARGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPVVCLSDDIETNECLDNNGGCWQDKAANITACKDTFRGRVCECPLVNGVQFKGDGYSSCKASGPGKCSINHGGCWHETRNGQTFTACLDHGDKCKCPSGFKGDAVNTCEDIDECKEKTACQCPECSCKNTWGSYDCSCSGGLLYIKDHDTCISKTAAETRSAWAAAWVILLGLGMAAGGGYLIYKYRIRQYMDSEIRAIMAQYMPLDSQVEVPNHYSDNRA*

Click here to download the sequence:
Link to NCBI Protein BLAST