Transcript Information: S_Transcript_287328.p1


Annotated TAIR IDAT3G15580.1
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)ATG8I, APG8H
Annotation TypeOrtholog
Chromosome Positionchr3:5274075-5275000 | Reverse length=115
E-Value1.5E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.662536905353
Replicate 228.103791460168
Replicate 334.141017392856
Condition 2: 8 Hour
Replicate 151.28248623882
Replicate 261.389417993536
Replicate 347.072496794334
Condition 3: 24 Hour
Replicate 143.299679775999
Replicate 235.47965740821
Replicate 334.38004862364


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_287328.p1 GENE.S_Transcript_287328~~S_Transcript_287328.p1 ORF type:5prime_partial len:168 (+),score=27.04,Atg8|PF02991.12|2.9e-42 S_Transcript_287328:1-504(+)
ATCTCACTTACGGTTCATTCATCCTCTCCGTTGTGCCATCTCACAGAAACACGCATCTATTCTATCGATCTGAAAGAGATTACGATTTACGAACAGAACAGAAACACCAGGCACAGGCAGCCATTGGAGATGGGCAAGTTACAACCTTTCAAGGACGAGTTCTCTTTCGAGGACAGGTTGAAGGAATCCACTGATATGCTTGCCAAATATCCTGACCGTGTCCCTGTGATTGCTGAAAAATACTCCAGAACTGACCTTCCTGAGTTGGAGAAGAAAAAATTTTTGGTACCAAGAGACATGTCTGTTGGGCATTTCATTCACATATTGAGTACCAGGCTCCAGCTCACTCCTGGCAAAGCTCTTTTTGTCTTCGTCAAAGATACATTGCCCCAAACATCCTGTTTGATGGATTTCGTCTATGAATCATACAAGGATGATGATGGGTTTCTTTACATGTGCTACAGCAGCGAAAAGACCTTTGGTGGTGTTTCTTCTGCGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_287328.p1 GENE.S_Transcript_287328~~S_Transcript_287328.p1 ORF type:5prime_partial len:168 (+),score=27.04,Atg8|PF02991.12|2.9e-42 S_Transcript_287328:1-504(+)
ISLTVHSSSPLCHLTETRIYSIDLKEITIYEQNRNTRHRQPLEMGKLQPFKDEFSFEDRLKESTDMLAKYPDRVPVIAEKYSRTDLPELEKKKFLVPRDMSVGHFIHILSTRLQLTPGKALFVFVKDTLPQTSCLMDFVYESYKDDDGFLYMCYSSEKTFGGVSSAV*

Click here to download the sequence:
Link to NCBI Protein BLAST