Transcript Information: S_Transcript_287371.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value5E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63364288655192
Replicate 21.3132612831854
Replicate 30.8782255277905
Condition 2: 8 Hour
Replicate 11.7771158597611
Replicate 22.1306522514025
Replicate 30.50752018107098
Condition 3: 24 Hour
Replicate 10
Replicate 21.6188436840248
Replicate 33.3028867673366


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_287371.p1 GENE.S_Transcript_287371~~S_Transcript_287371.p1 ORF type:3prime_partial len:84 (+),score=16.56,PPR_2|PF13041.2|1.4e-12,PPR_2|PF13041.2|7.7e-08,PPR|PF01535.16|5.1e-07,PPR|PF01535.16|1.8e-05,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|8.4e-06,PPR_3|PF13812.2|0.0031,PPR_3|PF13812.2|2.1 S_Transcript_287371:3-251(+)
ATGATAAAAGGACTTTCTAAGAAGGGGCTGTTAGATCAGGCTCATGAATTATTCAAGAAGATGGAGGAGCATGGCTGTTTTCCGGATCGTTGTTCCTACAATACACTCATTAGGGGTTTCCTTTGCAACAACCAAATCTCAAAGGGCCTGCAGCTTATTGAAACTATGACTAGCAGAGGTTTTGAAGCAGATGCTGGAACTTTGTCTTTATTCCTTGACTTGCTTACAGACAATCATGTTGACAAGTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_287371.p1 GENE.S_Transcript_287371~~S_Transcript_287371.p1 ORF type:3prime_partial len:84 (+),score=16.56,PPR_2|PF13041.2|1.4e-12,PPR_2|PF13041.2|7.7e-08,PPR|PF01535.16|5.1e-07,PPR|PF01535.16|1.8e-05,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|8.4e-06,PPR_3|PF13812.2|0.0031,PPR_3|PF13812.2|2.1 S_Transcript_287371:3-251(+)
MIKGLSKKGLLDQAHELFKKMEEHGCFPDRCSYNTLIRGFLCNNQISKGLQLIETMTSRGFEADAGTLSLFLDLLTDNHVDKS

Click here to download the sequence:
Link to NCBI Protein BLAST