Transcript Information: S_Transcript_287372.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2870547936483
Replicate 23.1025797815255
Replicate 33.7461807669814
Condition 2: 8 Hour
Replicate 11.8326507303786
Replicate 22.7964810799658
Replicate 31.3322404753113
Condition 3: 24 Hour
Replicate 15.9732103294593
Replicate 22.6559154191032
Replicate 33.9409444382994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_287372.p1 GENE.S_Transcript_287372~~S_Transcript_287372.p1 ORF type:5prime_partial len:128 (+),score=32.82 S_Transcript_287372:1-384(+)
AGCAAGTTTGAGGAGGACCACGGCAAGTTTTCTAACAACATTTTCAAGATATCCCAAGAGATTCAGGGCGTAAAGCGTTGTTTAGCAGGAAAGAATATGGTGAGAGAACAGCTGGAGAAGGAACTAGGCGATGTAAATGATAGGGCCAAGAAGCAAAATGGAGAGATGGAGGAGTTGCAACGTGCAGTTAGCCAACTGACAAAAGCAGCAGGAGAGCTCGATGTGACATTGAAGGAGAAGGATGAGCAACTTTCAACTCTTGCGGAGGAGAAACGCCAGGCCATCAGGCAACTGTGCTTATGGAGCGATAATCTCCAGGGTCACTATGATGAACTAAAGAGCATTGTGTCAAAGGCAACTTCAGAGAGGCGGGTGAGTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_287372.p1 GENE.S_Transcript_287372~~S_Transcript_287372.p1 ORF type:5prime_partial len:128 (+),score=32.82 S_Transcript_287372:1-384(+)
SKFEEDHGKFSNNIFKISQEIQGVKRCLAGKNMVREQLEKELGDVNDRAKKQNGEMEELQRAVSQLTKAAGELDVTLKEKDEQLSTLAEEKRQAIRQLCLWSDNLQGHYDELKSIVSKATSERRVSR*

Click here to download the sequence:
Link to NCBI Protein BLAST